RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SSBP1Q04837 148 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 CDNFQ49AH0 187 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 OR2W3Q7Z3T1 314 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 TCTE3Q8IZS6 198 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 GABRG1Q8N1C3 465 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 CCDC54Q8NEL0 328 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 MED28Q9H204 178 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 PRORYQ9H606 182 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 DSPP15924 2871 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 TRAV17A0A0B4J275 112 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 NDUFB6O95139 128 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 AKAIN1P0CW23 69 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 FCGR2AP12318 317 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 GNB3P16520 340 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 PTGFRP43088 359 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 ACTBP60709 375 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 ACTG1P63261 375 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 ZNF92Q03936 586 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 TBR1Q16650 682 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 SLC22A6Q4U2R8 563 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 OR11H7Q8NGC8 314 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 OR10R2Q8NGX6 335 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 KCNG3Q8TAE7 436 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 DEDD2Q8WXF8 326 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 EXTL1Q92935 676 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 ZNF486Q96H40 463 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 SELENOIQ9C0D9 397 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 PRRC2CQ9Y520 2896 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 SPENQ96T58 3664 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 DHRS7CA6NNS2 312 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 ICMTO60725 284 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 FAUP35544 74 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 STEAP1BQ6NZ63 245 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 ZNF782Q6ZMW2 699 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 FJX1Q86VR8 437 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 OR51S1Q8NGJ8 323 aa14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 TNRC6AQ8NDV7 1962 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-216ENST00000598201 DOCK7Q96N67 2140 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 SMLR1H3BR10 107 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 SOCS1O15524 211 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 CRTAPO75718 401 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 GSTT2P0CG29 244 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 NAT2P11245 290 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 CCL2P13500 99 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 RAD52P43351 418 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 GSK3AP49840 483 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 ARPC4P59998 168 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 FAM3AP98173 230 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 RIPPLY1Q0D2K3 151 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 OR10K1Q8NGX5 313 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 NUDCD2Q8WVJ2 157 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 C1QTNF5Q9BXJ0 243 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 TMEM59Q9BXS4 323 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 ZNF175Q9Y473 711 aa14.79□□□□□ -0.04
SHKBP1-216ENST00000598201 ARHGAP21Q5T5U3 1957 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 hCG_38984A0A1B0GV85 526 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 M0QYG6 137 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 IL18BPO95998 194 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 MELTFP08582 738 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 CD79AP11912 226 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 CXCL3P19876 107 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 ANXA7P20073 488 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 STOMP27105 288 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 PLAC9Q5JTB6 97 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 NOXA1Q86UR1 476 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 PNLDC1Q8NA58 520 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 TMEM229BQ8NBD8 167 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 TNFAIP8L1Q8WVP5 186 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 DACT3Q96B18 629 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 TINAGL1Q9GZM7 467 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 PRDM14Q9GZV8 571 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 ING3Q9NXR8 418 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 ING4Q9UNL4 249 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 PYCARD-AS1I3L0S3 204 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 UBBP0CG47 229 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 ALDH3B1P43353 468 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 TMEM50BP56557 158 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 TAS2R19P59542 299 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 COLCA1Q6ZS62 124 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 TRAPPC6BQ86SZ2 158 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 GVQW1Q8N7I0 195 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 OR4S1Q8NGB4 309 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 SEC22CQ9BRL7 303 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 MOV10Q9HCE1 1003 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 ATPIF1Q9UII2 106 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 KCNK7Q9Y2U2 307 aa14.78□□□□□ -0.04
SHKBP1-216ENST00000598201 MED12LQ86YW9 2145 aa14.77□□□□□ -0.04
SHKBP1-216ENST00000598201 SSX5O60225 188 aa14.77□□□□□ -0.04
SHKBP1-216ENST00000598201 CHRM2P08172 466 aa14.77□□□□□ -0.04
SHKBP1-216ENST00000598201 CCNOP22674 350 aa14.77□□□□□ -0.04
SHKBP1-216ENST00000598201 CD276Q5ZPR3 534 aa14.77□□□□□ -0.04
SHKBP1-216ENST00000598201 TMEM42Q69YG0 159 aa14.77□□□□□ -0.04
SHKBP1-216ENST00000598201 PIAS4Q8N2W9 510 aaPredicted RBP14.77□□□□□ -0.04
SHKBP1-216ENST00000598201 NUDT16L1Q9BRJ7 211 aaKnown RBP14.77□□□□□ -0.04
SHKBP1-216ENST00000598201 GINS4Q9BRT9 223 aa14.77□□□□□ -0.04
SHKBP1-216ENST00000598201 RGCCQ9H4X1 137 aa14.77□□□□□ -0.04
SHKBP1-216ENST00000598201 CLCF1Q9UBD9 225 aa14.77□□□□□ -0.04
SHKBP1-216ENST00000598201 BOLA1Q9Y3E2 137 aa14.77□□□□□ -0.04
SHKBP1-216ENST00000598201 IGKV1-27A0A075B6S5 117 aa14.77□□□□□ -0.05
SHKBP1-216ENST00000598201 A0A1B0GUH1 482 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms