RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 PRR23D1E9PI22 279 aaPredicted RBP10.3□□□□□ -0.76
TRIM28-212ENST00000597995 TSPAN9O75954 239 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 TSPAN15O95858 294 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 FBP1P09467 338 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 PRR23D2P0DMB1 279 aaPredicted RBP10.3□□□□□ -0.76
TRIM28-212ENST00000597995 MUC1P15941 1255 aaPredicted RBP10.3□□□□□ -0.76
TRIM28-212ENST00000597995 SLC2A5P22732 501 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 DDOSTP39656 456 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 ZNF121P58317 390 aaPredicted RBP10.3□□□□□ -0.76
TRIM28-212ENST00000597995 GRB2P62993 217 aaKnown RBP10.3□□□□□ -0.76
TRIM28-212ENST00000597995 FAM3AP98173 230 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 TAF13Q15543 124 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 C2orf68Q2NKX9 166 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 FAHD1Q6P587 224 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 SLC16A9Q7RTY1 509 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 FAM90A1Q86YD7 464 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 LY6G5BQ8NDX9 201 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 OPA3Q9H6K4 179 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 RNPEPL1Q9HAU8 725 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 SLC25A19Q9HC21 320 aa10.3□□□□□ -0.76
TRIM28-212ENST00000597995 hCG_38984A0A1B0GV85 526 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 BTBD17A6NE02 478 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 A6NLC8 198 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 GPR37O15354 613 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 GRPP07492 148 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 TGFBR2P37173 567 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 SLC15A1P46059 708 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 HCCSP53701 268 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 GUCA2AQ02747 115 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 DHRS7BQ6IAN0 325 aaPredicted RBP10.29□□□□□ -0.76
TRIM28-212ENST00000597995 ZNF826PQ6ZT77 177 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 FAM57BQ71RH2 274 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 SHFQ7M4L6 423 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 VMO1Q7Z5L0 202 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 WDR86Q86TI4 376 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 OTOSQ8NHW6 89 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 NRBF2Q96F24 287 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 TOR3AQ9H497 397 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 YY1AP1Q9H869 796 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 ZNF556Q9HAH1 456 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 DNAJC27Q9NZQ0 273 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 VPREB3Q9UKI3 123 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 ZNF281Q9Y2X9 895 aa10.29□□□□□ -0.76
TRIM28-212ENST00000597995 hCG_1807616A0A1W2PRN6 198 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 CCDC182A6NF36 153 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 PRR32B1ATL7 298 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 PRODHO43272 600 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 TBX1O43435 398 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 XRCC2O43543 280 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 MITFO75030 526 aaPredicted RBP10.28□□□□□ -0.76
TRIM28-212ENST00000597995 HMGN1P05114 100 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 ANXA2P07355 339 aaKnown RBP10.28□□□□□ -0.76
TRIM28-212ENST00000597995 PAICSP22234 425 aaKnown RBP10.28□□□□□ -0.76
TRIM28-212ENST00000597995 HSD11B1P28845 292 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 EPHA2P29317 976 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 NAA10P41227 235 aaPredicted RBP10.28□□□□□ -0.76
TRIM28-212ENST00000597995 CRISP1P54107 249 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 MICBQ29980 383 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 FBLN7Q53RD9 439 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 SLC36A1Q7Z2H8 476 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 C1QL4Q86Z23 238 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 C11orf53Q8IXP5 236 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 CMTM4Q8IZR5 234 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 GALNT4Q8N4A0 578 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 FAM110DQ8TAY7 271 aaPredicted RBP10.28□□□□□ -0.76
TRIM28-212ENST00000597995 THEM6Q8WUY1 208 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 ST8SIA4Q92187 359 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 REEP6Q96HR9 211 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 BRD7Q9NPI1 651 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 ZNRD1Q9P1U0 126 aa10.28□□□□□ -0.76
TRIM28-212ENST00000597995 IGHV3OR15-7A0A075B7D8 119 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 ZNF816-ZNF321PA0A0X1KG74 233 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 ANKRD30BLA7E2S9 258 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 PRKYO43930 277 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 LYNP07948 512 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 CSF1P09603 554 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 H2BFMP0C1H6 154 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 ALOX5APP20292 161 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 EEF1B2P24534 225 aaKnown RBP10.27□□□□□ -0.77
TRIM28-212ENST00000597995 GSK3AP49840 483 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 EFNB1P98172 346 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 POU4F2Q12837 409 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 APOFQ13790 326 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 PTGES3Q15185 160 aaKnown RBP10.27□□□□□ -0.77
TRIM28-212ENST00000597995 ATP6AP1Q15904 470 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 WDR38Q5JTN6 314 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 SLC35D3Q5M8T2 416 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 ATPAF1Q5TC12 328 aaPredicted RBP10.27□□□□□ -0.77
TRIM28-212ENST00000597995 BCDIN3DQ7Z5W3 292 aaKnown RBP10.27□□□□□ -0.77
TRIM28-212ENST00000597995 PDZD9Q8IXQ8 264 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 OR8S1Q8NH09 359 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 OR5R1Q8NH85 324 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 OR5K1Q8NHB7 308 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 C12orf43Q96C57 262 aaKnown RBP10.27□□□□□ -0.77
TRIM28-212ENST00000597995 LYZL4Q96KX0 146 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 CCL13Q99616 98 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 FGF23Q9GZV9 251 aaPredicted RBP10.27□□□□□ -0.77
TRIM28-212ENST00000597995 PAPOLBQ9NRJ5 636 aaKnown RBP10.27□□□□□ -0.77
TRIM28-212ENST00000597995 TVP23BQ9NYZ1 205 aa10.27□□□□□ -0.77
TRIM28-212ENST00000597995 ONECUT1Q9UBC0 465 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms