RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 SFRP4Q6FHJ7 346 aaPredicted RBP8.61□□□□□ -1.03
VPS4B-207ENST00000591519 RHOUQ7L0Q8 258 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 DCXRQ7Z4W1 244 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 BCDIN3DQ7Z5W3 292 aaKnown RBP8.61□□□□□ -1.03
VPS4B-207ENST00000591519 GCSAMQ8N6F7 178 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 PNLDC1Q8NA58 520 aaKnown RBP8.61□□□□□ -1.03
VPS4B-207ENST00000591519 OR6N2Q8NGY6 317 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 OR4F5Q8NH21 305 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 DNAJC9Q8WXX5 260 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 TAF15Q92804 592 aaKnown RBP eCLIP8.61□□□□□ -1.03
VPS4B-207ENST00000591519 STMN2Q93045 179 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 WDFY2Q96P53 400 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 TBX15Q96SF7 602 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 INTS14Q96SY0 518 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 KCNJ15Q99712 375 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 SIRPDQ9H106 197 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 OPA3Q9H6K4 179 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 RNPEPL1Q9HAU8 725 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 BEX1Q9HBH7 125 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 SLC25A19Q9HC21 320 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 N6AMT1Q9Y5N5 214 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 POMT1Q9Y6A1 747 aa8.61□□□□□ -1.03
VPS4B-207ENST00000591519 ADAM20O43506 726 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 XRCC2O43543 280 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 PRKYO43930 277 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 FCN3O75636 299 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 TOX4O94842 621 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 GLCEO94923 617 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 CRYBA1P05813 215 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 SFTPBP07988 381 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 MELTFP08582 738 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 MRPL3P09001 348 aaKnown RBP8.6□□□□□ -1.03
VPS4B-207ENST00000591519 FSTP19883 344 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 ANOS1P23352 680 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 OMGP23515 440 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 PRKXP51817 358 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 BLVRAP53004 296 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 ESRRGP62508 458 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 HOXA4Q00056 320 aaPredicted RBP8.6□□□□□ -1.03
VPS4B-207ENST00000591519 APOFQ13790 326 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 PDCD1Q15116 288 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 ZSCAN26Q16670 478 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 LINC01590Q5TEZ4 76 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 DPY19L4Q7Z388 723 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 FAM90A1Q86YD7 464 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 KRTAP19-1Q8IUB9 90 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 C11orf53Q8IXP5 236 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 TCEANCQ8N8B7 351 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 OR2AE1Q8NHA4 323 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 GATAD2BQ8WXI9 593 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 TECTBQ96PL2 329 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 IL4I1Q96RQ9 567 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 PCGF1Q9BSM1 259 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 COPS4Q9BT78 406 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 ADAT1Q9BUB4 502 aaKnown RBP8.6□□□□□ -1.03
VPS4B-207ENST00000591519 OSBPL10Q9BXB5 764 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 TTTY10Q9BZA0 68 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 SMURF1Q9HCE7 757 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 ACOXLQ9NUZ1 547 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 C14orf119Q9NWQ9 140 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 C1orf123Q9NWV4 160 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 C1RLQ9NZP8 487 aa8.6□□□□□ -1.03
VPS4B-207ENST00000591519 IGHV1-69DA0A0B4J2H0 117 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.59□□□□□ -1.03
VPS4B-207ENST00000591519 ZNF878C9JN71 531 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 DVL1O14640 695 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 KNG1P01042 644 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 IGHV1-69P01742 117 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 GRPP07492 148 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 SLC2A1P11166 492 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 MUC1P15941 1255 aaPredicted RBP8.59□□□□□ -1.03
VPS4B-207ENST00000591519 SLC15A1P46059 708 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 HCCSP53701 268 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 GRB2P62993 217 aaKnown RBP8.59□□□□□ -1.03
VPS4B-207ENST00000591519 FAM3AP98173 230 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 OR8B8Q15620 311 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 METTL11BQ5VVY1 283 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 SLX4IPQ5VYV7 408 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 RUSC1-AS1Q66K80 236 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 FIP1L1Q6UN15 594 aaKnown RBP8.59□□□□□ -1.03
VPS4B-207ENST00000591519 ZNF826PQ6ZT77 177 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 BTN2A1Q7KYR7 527 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 PRSS45Q7RTY3 260 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 C10orf67Q8IYJ2 551 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 CBR4Q8N4T8 237 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 LY6G5BQ8NDX9 201 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 OR56B2PQ8NGI1 322 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 SSMEM1Q8WWF3 244 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 DYRK2Q92630 601 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 SGK3Q96BR1 496 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 SLAMF6Q96DU3 332 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 CITED1Q99966 193 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 RBM4BQ9BQ04 359 aaKnown RBP8.59□□□□□ -1.03
VPS4B-207ENST00000591519 CHIAQ9BZP6 476 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 RASSF4Q9H2L5 321 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 TOR3AQ9H497 397 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 CNTD2Q9H8S5 307 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 SP140LQ9H930 580 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 DNAJC27Q9NZQ0 273 aa8.59□□□□□ -1.03
VPS4B-207ENST00000591519 ORC6Q9Y5N6 252 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms