RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 TNFAIP8L1Q8WVP5 186 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 PIGTQ969N2 578 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 FAM46BQ96A09 425 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 SPSB4Q96A44 273 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 PTX4Q96A99 478 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 FAM3DQ96BQ1 224 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 SGK3Q96BR1 496 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 S100PBPQ96BU1 408 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 ADAT3Q96EY9 351 aaPredicted RBP5.36□□□□□ -1.55
LIG3-206ENST00000586058 RADILQ96JH8 1075 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 MICU1Q9BPX6 476 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 RTL8AQ9BWD3 113 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 TMEM59Q9BXS4 323 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 SLC22A4Q9H015 551 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 ATG5Q9H1Y0 275 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 PPIL3Q9H2H8 161 aaKnown RBP5.36□□□□□ -1.55
LIG3-206ENST00000586058 NOX3Q9HBY0 568 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 GPR173Q9NS66 373 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 CGGBP1Q9UFW8 167 aaPredicted RBP5.36□□□□□ -1.55
LIG3-206ENST00000586058 NDRG3Q9UGV2 375 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 POU2F3Q9UKI9 436 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 OSGIN2Q9Y236 505 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 MPC1Q9Y5U8 109 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 AKAP13Q12802 2813 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 PLSCR5A0PG75 271 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 A6NIN4 97 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 OR5B21A6NL26 309 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 FAM90A27PA6NNH2 459 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 VGLL3A8MV65 326 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 A8MXE2 369 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 H3BUI4 141 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 TIMM8AO60220 97 aaPredicted RBP5.35□□□□□ -1.55
LIG3-206ENST00000586058 LMX1BO60663 402 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ICMTO60725 284 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 CRTAPO75718 401 aaPredicted RBP5.35□□□□□ -1.55
LIG3-206ENST00000586058 TPPPO94811 219 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 AGFG2O95081 481 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ECDO95905 644 aaPredicted RBP5.35□□□□□ -1.55
LIG3-206ENST00000586058 INHBBP09529 407 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 CECR9P0C854 216 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 GSTT2BP0CG30 244 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 TMEM225BP0DP42 221 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 RAC2P15153 192 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ADRA2CP18825 462 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 SERPINA2P20848 420 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 CPT2P23786 658 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 PTAFRP25105 342 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 THBS2P35442 1172 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 EVX1P49640 407 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ZNF83P51522 516 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 UCP2P55851 309 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 CLDN12P56749 244 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ACTBP60709 375 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ACTG1P63261 375 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 HGFACQ04756 655 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 PRDX4Q13162 271 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 SNTB2Q13425 540 aaKnown RBP5.35□□□□□ -1.55
LIG3-206ENST00000586058 GK2Q14410 553 aaPredicted RBP5.35□□□□□ -1.55
LIG3-206ENST00000586058 RSU1Q15404 277 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 TSC22D1Q15714 1073 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 KISS1Q15726 138 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ST3GAL2Q16842 350 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 C1orf100Q5SVJ3 147 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 FBXW12Q6X9E4 464 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 COLCA1Q6ZS62 124 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 Q6ZSR3 168 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 RFPL4BQ6ZWI9 263 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 FJX1Q86VR8 437 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 NR2C2APQ86WQ0 139 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ANGPTL5Q86XS5 388 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ZNF584Q8IVC4 421 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 MKXQ8IYA7 352 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 MFSD4AQ8N468 514 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 BHLHE23Q8NDY6 225 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 OR51D1Q8NGF3 324 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 OR52N4Q8NGI2 321 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 OR56B1Q8NGI3 324 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 SETD6Q8TBK2 473 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ENKURQ8TC29 256 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 RFT1Q96AA3 541 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 HAVCR1Q96D42 359 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 CCDC120Q96HB5 630 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 COX4I2Q96KJ9 171 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 LYZL4Q96KX0 146 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ADAT1Q9BUB4 502 aaKnown RBP5.35□□□□□ -1.55
LIG3-206ENST00000586058 METTL9Q9H1A3 318 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ABCG5Q9H222 651 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ESRP2Q9H6T0 727 aaKnown RBP5.35□□□□□ -1.55
LIG3-206ENST00000586058 CYSLTR2Q9NS75 346 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 C14orf119Q9NWQ9 140 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 TAS2R8Q9NYW2 309 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ZNF319Q9P2F9 582 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 GPR160Q9UJ42 338 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 RAB22AQ9UL26 194 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 ING4Q9UNL4 249 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 MRPS7Q9Y2R9 242 aaKnown RBP5.35□□□□□ -1.55
LIG3-206ENST00000586058 SLC25A15Q9Y619 301 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 V9GYH0 126 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 TANC2Q9HCD6 1990 aa5.35□□□□□ -1.55
LIG3-206ENST00000586058 IGHV2OR16-5A0A0B4J2B6 119 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms