RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 THAP5Q7Z6K1 395 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 SLC35F2Q8IXU6 374 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 ZDHHC23Q8IYP9 409 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 SIGLECL1Q8N7X8 197 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 GCDHQ92947 438 aaPredicted RBP10.31□□□□□ -0.76
SS18-225ENST00000585121 UPRTQ96BW1 309 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 ITPKCQ96DU7 683 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 RNF170Q96K19 258 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 OSBPL10Q9BXB5 764 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 PBOV1Q9GZY1 135 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 SEMA6AQ9H2E6 1030 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 VCX3BQ9H321 246 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 ZNF69Q9UC07 566 aa10.31□□□□□ -0.76
SS18-225ENST00000585121 ZNF816-ZNF321PA0A0X1KG74 233 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 CDIPTO14735 213 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 TMPRSS2O15393 492 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 ECDO95905 644 aaPredicted RBP10.3□□□□□ -0.76
SS18-225ENST00000585121 ACKR3P25106 362 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 CFHR2P36980 270 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 CSNK2BP67870 215 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 RIPPLY1Q0D2K3 151 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 C11orf91Q3C1V1 193 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 KLF17Q5JT82 389 aaPredicted RBP10.3□□□□□ -0.76
SS18-225ENST00000585121 C12orf73Q69YU5 71 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 ZNF322Q6U7Q0 402 aaPredicted RBP10.3□□□□□ -0.76
SS18-225ENST00000585121 WDR82Q6UXN9 313 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 SLC36A1Q7Z2H8 476 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 FAM90A1Q86YD7 464 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 PNLDC1Q8NA58 520 aaKnown RBP10.3□□□□□ -0.76
SS18-225ENST00000585121 OR10Z1Q8NGY1 313 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 OR5P3Q8WZ94 311 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 LYZL4Q96KX0 146 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 OR8B4Q96RC9 309 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 IL4I1Q96RQ9 567 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 PKP2Q99959 881 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 RBM4BQ9BQ04 359 aaKnown RBP10.3□□□□□ -0.76
SS18-225ENST00000585121 ZMAT3Q9HA38 289 aaKnown RBP10.3□□□□□ -0.76
SS18-225ENST00000585121 FAM206AQ9NX38 181 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 DNAJB11Q9UBS4 358 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 OAZ3Q9UMX2 235 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 GTF2A1LQ9UNN4 478 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 ORC6Q9Y5N6 252 aa10.3□□□□□ -0.76
SS18-225ENST00000585121 FBN3Q75N90 2809 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 IGHV3OR15-7A0A075B7D8 119 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 M0R129 80 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 MTRF1O75570 445 aaKnown RBP10.29□□□□□ -0.76
SS18-225ENST00000585121 EPHA2P29317 976 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 BPIFB3P59826 476 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 CXCR4P61073 352 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 FGF12P61328 243 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 UBA52P62987 128 aaKnown RBP10.29□□□□□ -0.76
SS18-225ENST00000585121 HOXA4Q00056 320 aaPredicted RBP10.29□□□□□ -0.76
SS18-225ENST00000585121 POU4F2Q12837 409 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 BAMBIQ13145 260 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 GPR157Q5UAW9 335 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 AADACL4Q5VUY2 407 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 DOK3Q7L591 496 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 BCDIN3DQ7Z5W3 292 aaKnown RBP10.29□□□□□ -0.76
SS18-225ENST00000585121 WDR86Q86TI4 376 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 C11orf53Q8IXP5 236 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 OR51E1Q8TCB6 317 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 NRG4Q8WWG1 115 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 ST8SIA4Q92187 359 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 DACT3Q96B18 629 aaPredicted RBP10.29□□□□□ -0.76
SS18-225ENST00000585121 C12orf43Q96C57 262 aaKnown RBP10.29□□□□□ -0.76
SS18-225ENST00000585121 CIB1Q99828 191 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 TTTY10Q9BZA0 68 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 TLNRD1Q9H1K6 362 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 RIBC2Q9H4K1 309 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 MOB1AQ9H8S9 216 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 CLN6Q9NWW5 311 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 HAO2Q9NYQ3 351 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 KAAG1Q9UBP8 84 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 CTSZQ9UBR2 303 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 WARS2Q9UGM6 360 aaKnown RBP10.29□□□□□ -0.76
SS18-225ENST00000585121 COPS3Q9UNS2 423 aa10.29□□□□□ -0.76
SS18-225ENST00000585121 IGHV3OR16-10A0A075B7F0 116 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 TRAV40A0A0B4J280 105 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 SAC3D1A6NKF1 404 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 ZNF879B4DU55 563 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 C22orf46C9J442 243 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 LOC110117498-PIK3R3F6TDL0 507 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 DVL1O14640 695 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 TNFRSF13BO14836 293 aaPredicted RBP10.28□□□□□ -0.76
SS18-225ENST00000585121 IGHV4-38-2P0DP08 117 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 EGR1P18146 543 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 ATP6V1E1P36543 226 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 CDC42P60953 191 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 EFNB1P98172 346 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 EGR3Q06889 387 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 BCL2L15Q5TBC7 163 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 ZBTB37Q5TC79 503 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 METTL11BQ5VVY1 283 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 ZDHHC22Q8N966 263 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 OR51G2Q8NGK0 314 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 RPL3LQ92901 407 aaKnown RBP10.28□□□□□ -0.76
SS18-225ENST00000585121 RFKQ969G6 155 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 FAM71F1Q96KD3 344 aaPredicted RBP10.28□□□□□ -0.76
SS18-225ENST00000585121 CCL13Q99616 98 aa10.28□□□□□ -0.76
SS18-225ENST00000585121 APOL4Q9BPW4 351 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms