RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 LHFPL4Q7Z7J7 247 aa8.9□□□□□ -0.98
CASC3-208ENST00000583649 C11orf53Q8IXP5 236 aa8.9□□□□□ -0.98
CASC3-208ENST00000583649 OR6V1Q8N148 313 aa8.9□□□□□ -0.98
CASC3-208ENST00000583649 OSR2Q8N2R0 312 aa8.9□□□□□ -0.98
CASC3-208ENST00000583649 CSNK2A3Q8NEV1 391 aa8.9□□□□□ -0.98
CASC3-208ENST00000583649 OR5M8Q8NGP6 311 aa8.9□□□□□ -0.98
CASC3-208ENST00000583649 STMN2Q93045 179 aa8.9□□□□□ -0.98
CASC3-208ENST00000583649 OR52B2Q96RD2 323 aa8.9□□□□□ -0.98
CASC3-208ENST00000583649 PRR25Q96S07 402 aa8.9□□□□□ -0.98
CASC3-208ENST00000583649 SH3GL1Q99961 368 aa8.9□□□□□ -0.98
CASC3-208ENST00000583649 PAPOLGQ9BWT3 736 aaKnown RBP8.9□□□□□ -0.98
CASC3-208ENST00000583649 C1orf21Q9H246 121 aa8.9□□□□□ -0.98
CASC3-208ENST00000583649 LIN7BQ9HAP6 207 aa8.9□□□□□ -0.98
CASC3-208ENST00000583649 KRCC1Q9NPI7 259 aaPredicted RBP8.9□□□□□ -0.98
CASC3-208ENST00000583649 SLC1A7O00341 560 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 ANGPT2O15123 496 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 SNNO75324 88 aaPredicted RBP8.89□□□□□ -0.99
CASC3-208ENST00000583649 LY86O95711 162 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 PGA5P0DJD9 388 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 AMY2BP19961 511 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 OR1E2P47887 323 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 WDR4P57081 412 aaKnown RBP8.89□□□□□ -0.99
CASC3-208ENST00000583649 MTPNP58546 118 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 RPL23AP62750 156 aaKnown RBP8.89□□□□□ -0.99
CASC3-208ENST00000583649 ELF3P78545 371 aaPredicted RBP8.89□□□□□ -0.99
CASC3-208ENST00000583649 KRT71Q3SY84 523 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 MINOS1Q5TGZ0 78 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 DPY19L2P2Q6ZN68 376 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 ZBTB49Q6ZSB9 765 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 TMPRSS11FQ6ZWK6 438 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 LINC00346Q8IVM7 164 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 OR10A6Q8NH74 314 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 SEH1LQ96EE3 360 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 HIST1H2AAQ96QV6 131 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 CGREF1Q99674 301 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 COPS4Q9BT78 406 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 TLNRD1Q9H1K6 362 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 KAT8Q9H7Z6 458 aaKnown RBP8.89□□□□□ -0.99
CASC3-208ENST00000583649 SRA1Q9HD15 236 aaKnown RBP8.89□□□□□ -0.99
CASC3-208ENST00000583649 NRIP3Q9NQ35 241 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 CYB5R1Q9UHQ9 305 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 ZNF256Q9Y2P7 627 aaPredicted RBP8.89□□□□□ -0.99
CASC3-208ENST00000583649 N6AMT1Q9Y5N5 214 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 MINOS1-NBL1R4GNA1 71 aa8.89□□□□□ -0.99
CASC3-208ENST00000583649 RBMY1BA6NDE4 496 aaKnown RBP8.88□□□□□ -0.99
CASC3-208ENST00000583649 RBMY1EA6NEQ0 496 aaKnown RBP8.88□□□□□ -0.99
CASC3-208ENST00000583649 APOC1P02654 83 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 RBMY1DP0C7P1 496 aaKnown RBP8.88□□□□□ -0.99
CASC3-208ENST00000583649 SLC15A1P46059 708 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 GPR4P46093 362 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 CEBPDP49716 269 aaPredicted RBP8.88□□□□□ -0.99
CASC3-208ENST00000583649 SLC35B1P78383 322 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 ABCA11PQ4W5N1 156 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 AGKQ53H12 422 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 TMEM200BQ69YZ2 307 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 ZNF770Q6IQ21 691 aaPredicted RBP8.88□□□□□ -0.99
CASC3-208ENST00000583649 DLEU7Q6UYE1 221 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 ADAMTSL5Q6ZMM2 481 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 MBOAT2Q6ZWT7 520 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 FUNDC1Q8IVP5 155 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 ZNF561Q8N587 486 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 COMMD1Q8N668 190 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 ZNRF1Q8ND25 227 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 KLHL30-AS1Q8NEE0 82 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 ZNF671Q8TAW3 534 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 NDNFQ8TB73 568 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 WDR13Q9H1Z4 485 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 VNN3Q9NY84 501 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 ADA2Q9NZK5 511 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 B9D1Q9UPM9 204 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 HILPDAQ9Y5L2 63 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 MPC1Q9Y5U8 109 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 IER3IP1Q9Y5U9 82 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 SIRT4Q9Y6E7 314 aaPredicted RBP8.88□□□□□ -0.99
CASC3-208ENST00000583649 DNAH1Q9P2D7 4330 aa8.88□□□□□ -0.99
CASC3-208ENST00000583649 TBX1O43435 398 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 AKR7A2O43488 359 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 DNAJC8O75937 253 aaPredicted RBP8.87□□□□□ -0.99
CASC3-208ENST00000583649 RBP4P02753 201 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 TNFRSF1BP20333 461 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 CBX1P83916 185 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 MXRA7P84157 204 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 NFYCQ13952 458 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 SEC23BQ15437 767 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 C9orf152Q5JTZ5 239 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 ZNF626Q68DY1 528 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 ERICH5Q6P6B1 374 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 ZNF782Q6ZMW2 699 aaPredicted RBP8.87□□□□□ -0.99
CASC3-208ENST00000583649 ETV3LQ6ZN32 361 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 C8orf86Q6ZUL3 223 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 OR2W3Q7Z3T1 314 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 WDR86Q86TI4 376 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 OFCC1Q8IZS5 231 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 OR11H6Q8NGC7 330 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 OR2T27Q8NH04 317 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 IL17DQ8TAD2 202 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 CHPT1Q8WUD6 406 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 TPD52L3Q96J77 140 aa8.87□□□□□ -0.99
CASC3-208ENST00000583649 GPX7Q96SL4 187 aaPredicted RBP8.87□□□□□ -0.99
CASC3-208ENST00000583649 P2RX4Q99571 388 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms