RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 H2AFVQ71UI9 128 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 MOB3BQ86TA1 216 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 OOSP2Q86WS3 158 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 KATNAL2Q8IYT4 538 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 ZNF679Q8IYX0 411 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 TBC1D21Q8IYX1 336 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 IQCKQ8N0W5 287 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 CLEC4FQ8N1N0 589 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 FDCSPQ8NFU4 85 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 STXBP6Q8NFX7 210 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 OR8K1Q8NGG5 319 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 MGARPQ8TDB4 240 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 PDCD6IPQ8WUM4 868 aaKnown RBP1.79□□□□□ -2.12
COPS3-217ENST00000583160 PSMF1Q92530 271 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 RGP1Q92546 391 aaPredicted RBP1.79□□□□□ -2.12
COPS3-217ENST00000583160 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.79□□□□□ -2.12
COPS3-217ENST00000583160 LRRC58Q96CX6 371 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 TGM7Q96PF1 710 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 PPP1R2P1Q96PQ5 205 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 NUDT9Q9BW91 350 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 ZNF416Q9BWM5 594 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 TRIM4Q9C037 500 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 OR2AG1Q9H205 316 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 TRIM45Q9H8W5 580 aaPredicted RBP1.79□□□□□ -2.12
COPS3-217ENST00000583160 MRM3Q9HC36 420 aaKnown RBP1.79□□□□□ -2.12
COPS3-217ENST00000583160 NT5MQ9NPB1 228 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 HRASLS2Q9NWW9 162 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 NINJ2Q9NZG7 142 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 CD84Q9UIB8 345 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 RPL36Q9Y3U8 105 aaKnown RBP1.79□□□□□ -2.12
COPS3-217ENST00000583160 MRPS18BQ9Y676 258 aaKnown RBP1.79□□□□□ -2.12
COPS3-217ENST00000583160 PRRC2CQ9Y520 2896 aaKnown RBP1.79□□□□□ -2.12
COPS3-217ENST00000583160 FBN2P35556 2912 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 OTOGQ6ZRI0 2925 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 TEP1Q99973 2627 aaKnown RBP1.78□□□□□ -2.12
COPS3-217ENST00000583160 DNAJC13O75165 2243 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 hCG_1818297A0A087WSY0 165 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 GLYATL1P3A0A0U1RQE8 302 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 A0A1B0GVX0 72 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 PDZK1P1A8MUH7 402 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 C2orf74A8MZ97 194 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 E7EQ34 232 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 H3BNH8 94 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 APOC4-APOC2K7ER74 178 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 KCNK1O00180 336 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 BTN3A3O00478 584 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 XKRYO14609 159 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 IGHG4P01861 327 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 APOC2P02655 101 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 BGLAPP02818 100 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 ATP1B2P14415 290 aaPredicted RBP1.78□□□□□ -2.12
COPS3-217ENST00000583160 CD9P21926 228 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 PCMT1P22061 227 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 RPS3P23396 243 aaKnown RBP eCLIP1.78□□□□□ -2.12
COPS3-217ENST00000583160 CASP14P31944 242 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 FOXN2P32314 431 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 NSG1P42857 185 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 FGF8P55075 233 aaPredicted RBP1.78□□□□□ -2.12
COPS3-217ENST00000583160 DCDP81605 110 aaKnown RBP1.78□□□□□ -2.12
COPS3-217ENST00000583160 FAM53BQ14153 422 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 HSP90AA4PQ58FG1 418 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 PRMT9Q6P2P2 845 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 XKRXQ6PP77 449 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 AFTPHQ6ULP2 937 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 SPESP1Q6UW49 350 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 TMEM205Q6UW68 189 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 CERS6Q6ZMG9 384 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 SNX20Q7Z614 316 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 TMEM135Q86UB9 458 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 RAB43Q86YS6 212 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 TRAPPC5Q8IUR0 188 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 GRAMD2AQ8IUY3 354 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 ZNF567Q8N184 647 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 OR5K2Q8NHB8 316 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 ITLN2Q8WWU7 325 aaPredicted RBP1.78□□□□□ -2.12
COPS3-217ENST00000583160 TFGQ92734 400 aaPredicted RBP1.78□□□□□ -2.12
COPS3-217ENST00000583160 CXorf40BQ96DE9 158 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 AURKBQ96GD4 344 aaPredicted RBP1.78□□□□□ -2.12
COPS3-217ENST00000583160 SH3YL1Q96HL8 342 aaPredicted RBP1.78□□□□□ -2.12
COPS3-217ENST00000583160 QKIQ96PU8 341 aaKnown RBP eCLIP1.78□□□□□ -2.12
COPS3-217ENST00000583160 TMEM237Q96Q45 408 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 CAPS2Q9BXY5 557 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 GBA3Q9H227 469 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 DPH5Q9H2P9 285 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 RBKSQ9H477 322 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 RPP21Q9H633 154 aaKnown RBP1.78□□□□□ -2.12
COPS3-217ENST00000583160 SYNDIG1Q9H7V2 258 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 VPS37BQ9H9H4 285 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 UGT1A7Q9HAW7 530 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 UGT1A10Q9HAW8 530 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 UGT1A8Q9HAW9 530 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 FANCEQ9HB96 536 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 FAM60AQ9NP50 221 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 AGPAT4Q9NRZ5 378 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 ASF1BQ9NVP2 202 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 NLE1Q9NVX2 485 aaPredicted RBP1.78□□□□□ -2.12
COPS3-217ENST00000583160 NXT1Q9UKK6 140 aaKnown RBP1.78□□□□□ -2.12
COPS3-217ENST00000583160 F11RQ9Y624 299 aaKnown RBP1.78□□□□□ -2.12
COPS3-217ENST00000583160 LRBAP50851 2863 aa1.78□□□□□ -2.12
COPS3-217ENST00000583160 INTS1Q8N201 2190 aaKnown RBP1.78□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms