RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 FOXL1Q12952 345 aa17.42■□□□□ 0.38
CCDC42-203ENST00000581598 APOFQ13790 326 aa17.42■□□□□ 0.38
CCDC42-203ENST00000581598 OR56B2PQ8NGI1 322 aa17.42■□□□□ 0.38
CCDC42-203ENST00000581598 SGMS2Q8NHU3 365 aa17.42■□□□□ 0.38
CCDC42-203ENST00000581598 SP140LQ9H930 580 aa17.42■□□□□ 0.38
CCDC42-203ENST00000581598 MARCH7Q9H992 704 aa17.42■□□□□ 0.38
CCDC42-203ENST00000581598 CENPMQ9NSP4 180 aa17.42■□□□□ 0.38
CCDC42-203ENST00000581598 HAO2Q9NYQ3 351 aa17.42■□□□□ 0.38
CCDC42-203ENST00000581598 H2AFY2Q9P0M6 372 aaPredicted RBP17.42■□□□□ 0.38
CCDC42-203ENST00000581598 WARS2Q9UGM6 360 aaKnown RBP17.42■□□□□ 0.38
CCDC42-203ENST00000581598 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCDC42-203ENST00000581598 SNTNA6NMZ2 147 aa17.41■□□□□ 0.38
CCDC42-203ENST00000581598 SLC1A7O00341 560 aa17.41■□□□□ 0.38
CCDC42-203ENST00000581598 TNFRSF13BO14836 293 aaPredicted RBP17.41■□□□□ 0.38
CCDC42-203ENST00000581598 NDUFA2O43678 99 aa17.41■□□□□ 0.38
CCDC42-203ENST00000581598 APOC1P02654 83 aa17.41■□□□□ 0.38
CCDC42-203ENST00000581598 CCDC159P0C7I6 412 aa17.41■□□□□ 0.38
CCDC42-203ENST00000581598 CSNK2BP67870 215 aa17.41■□□□□ 0.38
CCDC42-203ENST00000581598 ZNF91Q05481 1191 aa17.41■□□□□ 0.38
CCDC42-203ENST00000581598 BAMBIQ13145 260 aa17.41■□□□□ 0.38
CCDC42-203ENST00000581598 OR6K6Q8NGW6 343 aa17.41■□□□□ 0.38
CCDC42-203ENST00000581598 TEAD3Q99594 435 aa17.41■□□□□ 0.38
CCDC42-203ENST00000581598 MRPS18AQ9NVS2 196 aaKnown RBP17.41■□□□□ 0.38
CCDC42-203ENST00000581598 TRAV38-1A0A0B4J264 116 aa17.4■□□□□ 0.38
CCDC42-203ENST00000581598 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.4■□□□□ 0.38
CCDC42-203ENST00000581598 ENSAO43768 121 aaKnown RBP17.4■□□□□ 0.38
CCDC42-203ENST00000581598 RNASE1P07998 156 aaKnown RBP17.4■□□□□ 0.38
CCDC42-203ENST00000581598 SLC2A1P11166 492 aa17.4■□□□□ 0.38
CCDC42-203ENST00000581598 DBTP11182 482 aaKnown RBP17.4■□□□□ 0.38
CCDC42-203ENST00000581598 GSTT1P30711 240 aa17.4■□□□□ 0.38
CCDC42-203ENST00000581598 BPIFB3P59826 476 aa17.4■□□□□ 0.38
CCDC42-203ENST00000581598 KLHL12Q53G59 568 aa17.4■□□□□ 0.38
CCDC42-203ENST00000581598 LCN1P1Q5VSP4 162 aa17.4■□□□□ 0.38
CCDC42-203ENST00000581598 CD276Q5ZPR3 534 aa17.4■□□□□ 0.38
CCDC42-203ENST00000581598 PRSS45Q7RTY3 260 aa17.4■□□□□ 0.38
CCDC42-203ENST00000581598 RNF133Q8WVZ7 376 aa17.4■□□□□ 0.38
CCDC42-203ENST00000581598 YTHDF1Q9BYJ9 559 aaKnown RBP17.4■□□□□ 0.38
CCDC42-203ENST00000581598 PRDM13Q9H4Q3 707 aa17.4■□□□□ 0.38
CCDC42-203ENST00000581598 C14orf119Q9NWQ9 140 aa17.4■□□□□ 0.38
CCDC42-203ENST00000581598 RPL36Q9Y3U8 105 aaKnown RBP17.4■□□□□ 0.38
CCDC42-203ENST00000581598 TRAV40A0A0B4J280 105 aa17.39■□□□□ 0.37
CCDC42-203ENST00000581598 C22orf46C9J442 243 aa17.39■□□□□ 0.37
CCDC42-203ENST00000581598 EIF2B1Q14232 305 aaKnown RBP17.39■□□□□ 0.37
CCDC42-203ENST00000581598 C11orf91Q3C1V1 193 aa17.39■□□□□ 0.37
CCDC42-203ENST00000581598 RBM48Q5RL73 367 aaKnown RBP17.39■□□□□ 0.37
CCDC42-203ENST00000581598 SHFQ7M4L6 423 aa17.39■□□□□ 0.37
CCDC42-203ENST00000581598 DPY19L4Q7Z388 723 aa17.39■□□□□ 0.37
CCDC42-203ENST00000581598 C19orf18Q8NEA5 215 aa17.39■□□□□ 0.37
CCDC42-203ENST00000581598 INTS14Q96SY0 518 aa17.39■□□□□ 0.37
CCDC42-203ENST00000581598 ABHD6Q9BV23 337 aa17.39■□□□□ 0.37
CCDC42-203ENST00000581598 ZNF747Q9BV97 191 aa17.39■□□□□ 0.37
CCDC42-203ENST00000581598 FKBP14Q9NWM8 211 aa17.39■□□□□ 0.37
CCDC42-203ENST00000581598 ERVK-18Q9QC07 812 aa17.39■□□□□ 0.37
CCDC42-203ENST00000581598 CTSZQ9UBR2 303 aa17.39■□□□□ 0.37
CCDC42-203ENST00000581598 PSORS1C1Q9UIG5 152 aa17.39■□□□□ 0.37
CCDC42-203ENST00000581598 OOEPA6NGQ2 149 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 ANKRD30BLA7E2S9 258 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 XPNPEP2O43895 674 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 LHBP01229 141 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 LIPFP07098 398 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 PIPP12273 146 aaPredicted RBP17.38■□□□□ 0.37
CCDC42-203ENST00000581598 EGR1P18146 543 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 CFL1P23528 166 aaKnown RBP17.38■□□□□ 0.37
CCDC42-203ENST00000581598 CX3CR1P49238 355 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 RPS7P62081 194 aaKnown RBP17.38■□□□□ 0.37
CCDC42-203ENST00000581598 FAM3AP98173 230 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 SLC16A9Q7RTY1 509 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 GCSAMQ8N6F7 178 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 BPIFB6Q8NFQ5 453 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 OR52H1Q8NGJ2 320 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 OR6N2Q8NGY6 317 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 SLC25A28Q96A46 364 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 SGK3Q96BR1 496 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 AMBNQ9NP70 447 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 C1orf123Q9NWV4 160 aa17.38■□□□□ 0.37
CCDC42-203ENST00000581598 hCG_38984A0A1B0GV85 526 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 ANXA2P07355 339 aaKnown RBP17.37■□□□□ 0.37
CCDC42-203ENST00000581598 CRHBPP24387 322 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 HSD11B1P28845 292 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 OPRL1P41146 370 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 FGF12P61328 243 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 POU4F2Q12837 409 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 SLC9A3R2Q15599 337 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 TIGD6Q17RP2 521 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 SFRP4Q6FHJ7 346 aaPredicted RBP17.37■□□□□ 0.37
CCDC42-203ENST00000581598 ERI1Q8IV48 349 aaKnown RBP17.37■□□□□ 0.37
CCDC42-203ENST00000581598 TIGD4Q8IY51 512 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 RNFT2Q96EX2 444 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 DUX5Q96PT3 197 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 NR1H4Q96RI1 486 aaPredicted RBP17.37■□□□□ 0.37
CCDC42-203ENST00000581598 RGCCQ9H4X1 137 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 ADGRL4Q9HBW9 690 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 CNOT2Q9NZN8 540 aaKnown RBP17.37■□□□□ 0.37
CCDC42-203ENST00000581598 KAAG1Q9UBP8 84 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 EXOGQ9Y2C4 368 aaKnown RBP17.37■□□□□ 0.37
CCDC42-203ENST00000581598 N6AMT1Q9Y5N5 214 aa17.37■□□□□ 0.37
CCDC42-203ENST00000581598 IGHV3OR16-10A0A075B7F0 116 aa17.36■□□□□ 0.37
CCDC42-203ENST00000581598 EFCAB10A6NFE3 127 aa17.36■□□□□ 0.37
CCDC42-203ENST00000581598 C3orf80F5H4A9 247 aa17.36■□□□□ 0.37
CCDC42-203ENST00000581598 TBX1O43435 398 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms