RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 MAB21L2Q9Y586 359 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 NCOA6Q14686 2063 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 LOC100289279A0A1B0GTE1 492 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 AQP7O14520 342 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 SRSF10O75494 262 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 CTAG2O75638 210 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ACSM4P0C7M7 580 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 PCGF3Q3KNV8 242 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 DMRTC1Q5HYR2 192 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 C10orf128Q5T292 105 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 TMEM244Q5VVB8 128 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 NLRC3Q7RTR2 1065 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 P4HA3Q7Z4N8 544 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 FTMTQ8N4E7 242 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 INTS12Q96CB8 462 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 GPR35Q9HC97 309 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ADGRG4Q8IZF6 3080 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 GTF3C1Q12789 2109 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 GGT3PA6NGU5 568 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 M0R233 179 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 XRCC3O43542 346 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SYT7O43581 403 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MTRF1O75570 445 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RBBP9O75884 186 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 UBCP0CG48 685 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ACHEP22303 614 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 GUCA1AP43080 201 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FOXF2Q12947 444 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 C9orf106Q8NAJ2 232 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZCCHC14Q8WYQ9 949 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PNPLA2Q96AD5 504 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CYYR1Q96J86 154 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RADILQ96JH8 1075 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 LINC00052Q96N35 136 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF436Q9C0F3 470 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PBOV1Q9GZY1 135 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SLCO5A1Q9H2Y9 848 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 NELFAQ9H3P2 528 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 BCO1Q9HAY6 547 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 NPTNQ9Y639 398 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ARPC4-TTLL3A0A0A6YYG9 625 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TMEM272A0A1B0GTI8 110 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 hCG_1807616A0A1W2PRN6 198 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 C5orf63A6NC05 138 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZP3P21754 424 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MSR1P21757 451 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MRPS10P82664 201 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 C2orf68Q2NKX9 166 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ANKRD16Q6P6B7 361 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RNF122Q9H9V4 155 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PLEKHA1Q9HB21 404 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MED12LQ86YW9 2145 aa11.08□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PYCARD-AS1I3L0S3 204 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 DBHP09172 617 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ABOP16442 354 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 AGTR1P30556 359 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PLA2G5P39877 138 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 BTN1A1Q13410 526 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 DEGS2Q6QHC5 323 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF100Q8IYN0 542 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CNEP1R1Q8N9A8 125 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 C15orf40Q8WUR7 153 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SARAFQ96BY9 339 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FOXB1Q99853 325 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 REG4Q9BYZ8 158 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PNRC2Q9NPJ4 139 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FAM206AQ9NX38 181 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 EMC3Q9P0I2 261 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CLCF1Q9UBD9 225 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ANKRD20A5PA0PJZ0 165 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TEX46H3BTG2 121 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TTRP02766 147 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 IL32P24001 234 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MNDAP41218 407 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MMP16P51512 607 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF84P51523 738 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF133P52736 654 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RAG2P55895 527 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RNPS1Q15287 305 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ADGRE4PQ86SQ3 457 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SKA3Q8IX90 412 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OR51E1Q8TCB6 317 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 APH1AQ96BI3 265 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TMEM38BQ9NVV0 291 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MGAT4CQ9UBM8 478 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 KIF25Q9UIL4 384 aa11.07□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF878C9JN71 531 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 E9PLN8 166 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RGS11O94810 467 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RLN1P04808 185 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ARF1P84077 181 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FAM180AQ6UWF9 173 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF813Q6ZN06 617 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SEM1Q6ZVN7 128 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ABHD12BQ7Z5M8 362 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 AKR7LQ8NHP1 331 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ST8SIA4Q92187 359 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TMEM45BQ96B21 275 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SNRNP40Q96DI7 357 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SOX7Q9BT81 388 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms