RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 POU1F1P28069 291 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 HAAOP46952 286 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 GP2P55259 537 aaKnown RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 PRSS12P56730 875 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 CTXN1P60606 82 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 LSM6P62312 80 aaKnown RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 POU4F2Q12837 409 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 NFYCQ13952 458 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 GK2Q14410 553 aaPredicted RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 TCTEX1D4Q5JR98 221 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 ZFAND6Q6FIF0 208 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 ERICH5Q6P6B1 374 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 DUX4L9Q6RFH8 374 aaPredicted RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 DLEU7Q6UYE1 221 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 ZNF600Q6ZNG1 722 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 COLCA1Q6ZS62 124 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 CENPVQ7Z7K6 275 aaPredicted RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 AQP12AQ8IXF9 295 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 MRPL41Q8IXM3 137 aaKnown RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 SLC15A3Q8IY34 581 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 FGFRL1Q8N441 504 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 GJC3Q8NFK1 279 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 OR9Q1Q8NGQ5 310 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 LRRC29Q8WV35 223 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 TMEM239Q8WW34 195 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 LIPHQ8WWY8 451 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 STMN2Q93045 179 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 UTP4Q969X6 686 aaKnown RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 SLCO4A1Q96BD0 722 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 ISOC1Q96CN7 298 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 AJUBAQ96IF1 538 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 CDRT15Q96T59 188 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 ZNF649Q9BS31 505 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 NDEL1Q9GZM8 345 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 PAIP1Q9H074 479 aaKnown RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 DNTTIP1Q9H147 329 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 ZMAT4Q9H898 229 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 HEXA-AS1Q9H8Q6 139 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 RNPEPL1Q9HAU8 725 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 MRPL15Q9P015 296 aaKnown RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 ACTR3BQ9P1U1 418 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 MBD2Q9UBB5 411 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 DUX4Q9UBX2 424 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 SLC25A10Q9UBX3 287 aaPredicted RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 POMPQ9Y244 141 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 SH3GLB1Q9Y371 365 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 MED31Q9Y3C7 131 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 LSM4Q9Y4Z0 139 aaKnown RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 ALMS1Q8TCU4 4167 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 CSMD3Q7Z407 3707 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 TRBV5-3A0A0A0MS03 114 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 hCG_1809904A0A1W2PP81 198 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 A0A1W2PPE2 198 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 A0A1W2PR64 198 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 A0A1W2PRV1 198 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 GGT3PA6NGU5 568 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 H7C1C5 153 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 FXYD1O00168 92 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 BHLHE40O14503 412 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 ACOT8O14734 319 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 OR5F1O95221 314 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 LYPD3O95274 346 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 LHBP01229 141 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 SCG5P05408 212 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 NDUFB7P17568 137 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 GPX2P18283 190 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 AZGP1P25311 298 aaKnown RBP4.74□□□□□ -1.65
SMG6-219ENST00000575663 GGT2P36268 569 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 NAA10P41227 235 aaPredicted RBP4.74□□□□□ -1.65
SMG6-219ENST00000575663 TAS2R41P59536 307 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 LCN6P62502 163 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 IL5RAQ01344 420 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 LAPTM4AQ15012 233 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 DUSP7Q16829 419 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 PLA1AQ53H76 456 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 C1orf146Q5VVC0 180 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 NANOGP8Q6NSW7 305 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 SLC2A7Q6PXP3 512 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 ADAMTSL5Q6ZMM2 481 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 ZNF826PQ6ZT77 177 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 DHDDSQ86SQ9 333 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 TMEM219Q86XT9 240 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 GLB1L2Q8IW92 636 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 OR9I1Q8NGQ6 314 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 OR8S1Q8NH09 359 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 SLC26A7Q8TE54 656 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 TMEM255BQ8WV15 326 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 CAPSLQ8WWF8 208 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 RASSF5Q8WWW0 418 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 SGK3Q96BR1 496 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 AKR1E2Q96JD6 320 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 PRSS27Q9BQR3 290 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 POLR2J2Q9GZM3 115 aaKnown RBP4.74□□□□□ -1.65
SMG6-219ENST00000575663 POLR2J3Q9H1A7 115 aaKnown RBP4.74□□□□□ -1.65
SMG6-219ENST00000575663 OPA3Q9H6K4 179 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 GORASP2Q9H8Y8 452 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 C8orf4Q9NR00 106 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 GRHPRQ9UBQ7 328 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 MAGEL2Q9UJ55 1249 aa4.74□□□□□ -1.65
SMG6-219ENST00000575663 RPS6KA6Q9UK32 745 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms