RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 CSNK2A1P68400 391 aaPredicted RBP12.76□□□□□ -0.37
SMG6-215ENST00000574501 FMODQ06828 376 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 FNDC7Q5VTL7 733 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 CYB5R2Q6BCY4 276 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 TGIF2LXQ8IUE1 241 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.76□□□□□ -0.37
SMG6-215ENST00000574501 CSNK2A3Q8NEV1 391 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 ZNF519Q8TB69 540 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 FNDC9Q8TBE3 224 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 FAM213BQ8TBF2 198 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 TSACCQ96A04 125 aaPredicted RBP12.76□□□□□ -0.37
SMG6-215ENST00000574501 RAB39BQ96DA2 213 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 SCGB3A2Q96PL1 93 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 OR2M4Q96R27 311 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 CCDC3Q9BQI4 270 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 TCEAL2Q9H3H9 227 aaPredicted RBP12.76□□□□□ -0.37
SMG6-215ENST00000574501 NELFAQ9H3P2 528 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 OSGIN2Q9Y236 505 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 RFNGQ9Y644 331 aa12.76□□□□□ -0.37
SMG6-215ENST00000574501 ATXN7O15265 892 aaPredicted RBP12.75□□□□□ -0.37
SMG6-215ENST00000574501 SYT7O43581 403 aa12.75□□□□□ -0.37
SMG6-215ENST00000574501 NSA2O95478 260 aaKnown RBP12.75□□□□□ -0.37
SMG6-215ENST00000574501 NKX6-1P78426 367 aaPredicted RBP12.75□□□□□ -0.37
SMG6-215ENST00000574501 GLO1Q04760 184 aa12.75□□□□□ -0.37
SMG6-215ENST00000574501 UBE2V2Q15819 145 aa12.75□□□□□ -0.37
SMG6-215ENST00000574501 USF2Q15853 346 aaPredicted RBP12.75□□□□□ -0.37
SMG6-215ENST00000574501 C1orf140Q5VVS0 124 aa12.75□□□□□ -0.37
SMG6-215ENST00000574501 PLXDC2Q6UX71 529 aa12.75□□□□□ -0.37
SMG6-215ENST00000574501 TMEM182Q6ZP80 229 aaPredicted RBP12.75□□□□□ -0.37
SMG6-215ENST00000574501 LHFPL1Q86WI0 220 aa12.75□□□□□ -0.37
SMG6-215ENST00000574501 OR14C36Q8NHC7 312 aa12.75□□□□□ -0.37
SMG6-215ENST00000574501 MRPL24Q96A35 216 aaKnown RBP12.75□□□□□ -0.37
SMG6-215ENST00000574501 DGAT2Q96PD7 388 aa12.75□□□□□ -0.37
SMG6-215ENST00000574501 UCK1Q9HA47 277 aa12.75□□□□□ -0.37
SMG6-215ENST00000574501 CUTCQ9NTM9 273 aa12.75□□□□□ -0.37
SMG6-215ENST00000574501 C1orf123Q9NWV4 160 aa12.75□□□□□ -0.37
SMG6-215ENST00000574501 H3BQ15 152 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 XRCC2O43543 280 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 NUDT14O95848 222 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 SEC11BP0C7V7 166 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 HLA-DOBP13765 273 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 ZNF823P16415 610 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 GPR3P46089 330 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 OR3A4PP47883 348 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 DHPSP49366 369 aaPredicted RBP12.74□□□□□ -0.37
SMG6-215ENST00000574501 ASCL1P50553 236 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 SPCS3P61009 180 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 CCL20P78556 96 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 CHAF1BQ13112 559 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 PRR22Q8IZ63 422 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 PATE1Q8WXA2 126 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 RSC1A1Q92681 617 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 CCNL2Q96S94 520 aaPredicted RBP12.74□□□□□ -0.37
SMG6-215ENST00000574501 DCAF16Q9NXF7 216 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 CA14Q9ULX7 337 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 B3GALT5Q9Y2C3 310 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 MRPS23Q9Y3D9 190 aaKnown RBP12.74□□□□□ -0.37
SMG6-215ENST00000574501 MUC22E2RYF6 1773 aaPredicted RBP12.74□□□□□ -0.37
SMG6-215ENST00000574501 OR5H15A6NDH6 313 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 OR5H1A6NKK0 313 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 FIGNL2A6NMB9 653 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 H0YL77 283 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 HEXBP07686 556 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 SNRPCP09234 159 aaKnown RBP12.74□□□□□ -0.37
SMG6-215ENST00000574501 QDPRP09417 244 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 H2BFMP0C1H6 154 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 C5AR1P21730 350 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 FCARP24071 287 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 SNU13P55769 128 aaKnown RBP12.74□□□□□ -0.37
SMG6-215ENST00000574501 HAGHQ16775 308 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 C4orf17Q53FE4 359 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 GGNBP1Q5YKI7 109 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 OR2T2Q6IF00 324 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 OR1E3Q8WZA6 343 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 POM121Q96HA1 1249 aa12.74□□□□□ -0.37
SMG6-215ENST00000574501 MRPS28Q9Y2Q9 187 aaKnown RBP12.74□□□□□ -0.37
SMG6-215ENST00000574501 KIAA0100Q14667 2235 aaKnown RBP12.74□□□□□ -0.37
SMG6-215ENST00000574501 A8MVM7 634 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 HCRTR2O43614 444 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 CDC14BO60729 498 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 SCGNO76038 276 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 DIRAS3O95661 229 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 CHRM2P08172 466 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 UBE2KP61086 200 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMG6-215ENST00000574501 SFTPA2Q8IWL1 248 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 AVL9Q8NBF6 648 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 OR10AD1Q8NGE0 317 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 OR14K1Q8NGZ2 314 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 BAHD1Q8TBE0 780 aaPredicted RBP12.73□□□□□ -0.37
SMG6-215ENST00000574501 SOX7Q9BT81 388 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 ARV1Q9H2C2 271 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 CRLF2Q9HC73 371 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 VSX1Q9NZR4 365 aaPredicted RBP12.73□□□□□ -0.37
SMG6-215ENST00000574501 ARHGEF17Q96PE2 2063 aaPredicted RBP12.73□□□□□ -0.37
SMG6-215ENST00000574501 BORCS7-ASMTA0A0B4J1R7 106 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 H0Y8X5 98 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 TCAPO15273 167 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 CRTAPO75718 401 aaPredicted RBP12.73□□□□□ -0.37
SMG6-215ENST00000574501 UTS2O95399 124 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms