RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 PAPOLGQ9BWT3 736 aaKnown RBP14.36□□□□□ -0.11
SMG6-212ENST00000573153 ADGRL4Q9HBW9 690 aa14.36□□□□□ -0.11
SMG6-212ENST00000573153 KAAG1Q9UBP8 84 aa14.36□□□□□ -0.11
SMG6-212ENST00000573153 CLN8Q9UBY8 286 aa14.36□□□□□ -0.11
SMG6-212ENST00000573153 IGHV3OR16-10A0A075B7F0 116 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 TMEM269A0A1B0GVZ9 245 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 TMEM210A6NLX4 147 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 SRSF10O75494 262 aaKnown RBP14.35□□□□□ -0.11
SMG6-212ENST00000573153 CFPP27918 469 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 GFOD2Q3B7J2 385 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 ZNF829Q3KNS6 432 aaPredicted RBP14.35□□□□□ -0.11
SMG6-212ENST00000573153 ZFP1Q6P2D0 407 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 BTNL3Q6UXE8 466 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 CCDC121Q6ZUS5 278 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 BPIFB2Q8N4F0 458 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 OR5P3Q8WZ94 311 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 JMJD8Q96S16 334 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 NUDT16L1Q9BRJ7 211 aaKnown RBP14.35□□□□□ -0.11
SMG6-212ENST00000573153 SEMA6AQ9H2E6 1030 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 PRDM13Q9H4Q3 707 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 CLN6Q9NWW5 311 aa14.35□□□□□ -0.11
SMG6-212ENST00000573153 H2AFY2Q9P0M6 372 aaPredicted RBP14.35□□□□□ -0.11
SMG6-212ENST00000573153 WARS2Q9UGM6 360 aaKnown RBP14.35□□□□□ -0.11
SMG6-212ENST00000573153 NUFIP1Q9UHK0 495 aaKnown RBP14.35□□□□□ -0.11
SMG6-212ENST00000573153 TRAV40A0A0B4J280 105 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 DNAJC9-AS1A6NH13 148 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 A6NLC8 198 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 ANXA2P2A6NMY6 339 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 E9PQ18 207 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 H3BNX3 289 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 TRIM77I1YAP6 450 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 MUC1P15941 1255 aaPredicted RBP14.34□□□□□ -0.11
SMG6-212ENST00000573153 FPR2P25090 351 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 RIDAP52758 137 aaKnown RBP14.34□□□□□ -0.11
SMG6-212ENST00000573153 PRDX4Q13162 271 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 TMED1Q13445 227 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 ZBTB37Q5TC79 503 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 ZNF322Q6U7Q0 402 aaPredicted RBP14.34□□□□□ -0.11
SMG6-212ENST00000573153 SLC35F2Q8IXU6 374 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 OR8J1Q8NGP2 316 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 OR10Z1Q8NGY1 313 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 PYDC1Q8WXC3 89 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 C12orf43Q96C57 262 aaKnown RBP14.34□□□□□ -0.11
SMG6-212ENST00000573153 IL4I1Q96RQ9 567 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 TBX15Q96SF7 602 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 MICU1Q9BPX6 476 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 RTL8AQ9BWD3 113 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 PBOV1Q9GZY1 135 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 MOB1AQ9H8S9 216 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 USE1Q9NZ43 259 aa14.34□□□□□ -0.11
SMG6-212ENST00000573153 IGHV3OR15-7A0A075B7D8 119 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 ZNF816-ZNF321PA0A0X1KG74 233 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 MDFIC2A0A1B0GVS7 189 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 SRRM5B3KS81 715 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 GYPAP02724 150 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 ALPLP05186 524 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 HTR1FP30939 366 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 POLR2IP36954 125 aaKnown RBP14.33□□□□□ -0.12
SMG6-212ENST00000573153 MAP2K3P46734 347 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 FGF12P61328 243 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 EGR3Q06889 387 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 POU4F2Q12837 409 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 KPNB1Q14974 876 aaKnown RBP14.33□□□□□ -0.12
SMG6-212ENST00000573153 Q6ZSR3 168 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 PKP2Q99959 881 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 SIRPDQ9H106 197 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 RASSF4Q9H2L5 321 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 ERVK-18Q9QC07 812 aa14.33□□□□□ -0.12
SMG6-212ENST00000573153 hCG_1807616A0A1W2PRN6 198 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 SAC3D1A6NKF1 404 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 ZNF850A8MQ14 1090 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 PSMD9O00233 223 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 ADAM20O43506 726 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 ENSAO43768 121 aaKnown RBP14.32□□□□□ -0.12
SMG6-212ENST00000573153 SFTPBP07988 381 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 PRTN3P24158 256 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 CXCR4P61073 352 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 MFGE8Q08431 387 aaPredicted RBP14.32□□□□□ -0.12
SMG6-212ENST00000573153 CD276Q5ZPR3 534 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 C10orf67Q8IYJ2 551 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 ZDHHC23Q8IYP9 409 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 BOLLQ8N9W6 283 aaKnown RBP14.32□□□□□ -0.12
SMG6-212ENST00000573153 LRRC29Q8WV35 223 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 TRUB1Q8WWH5 349 aaKnown RBP14.32□□□□□ -0.12
SMG6-212ENST00000573153 PPP1R14AQ96A00 147 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 DUX5Q96PT3 197 aa14.32□□□□□ -0.12
SMG6-212ENST00000573153 MRM2Q9UI43 246 aaKnown RBP14.32□□□□□ -0.12
SMG6-212ENST00000573153 ZNF670-ZNF695F2Z2N8 137 aa14.31□□□□□ -0.12
SMG6-212ENST00000573153 CLDN34H7C241 214 aa14.31□□□□□ -0.12
SMG6-212ENST00000573153 CDIPTO14735 213 aa14.31□□□□□ -0.12
SMG6-212ENST00000573153 TTRP02766 147 aa14.31□□□□□ -0.12
SMG6-212ENST00000573153 LIPFP07098 398 aa14.31□□□□□ -0.12
SMG6-212ENST00000573153 MICBQ29980 383 aa14.31□□□□□ -0.12
SMG6-212ENST00000573153 CEACAM21Q3KPI0 293 aa14.31□□□□□ -0.12
SMG6-212ENST00000573153 WDR38Q5JTN6 314 aa14.31□□□□□ -0.12
SMG6-212ENST00000573153 SLC25A30Q5SVS4 291 aa14.31□□□□□ -0.12
SMG6-212ENST00000573153 ZNF684Q5T5D7 378 aa14.31□□□□□ -0.12
SMG6-212ENST00000573153 ATPAF1Q5TC12 328 aaPredicted RBP14.31□□□□□ -0.12
SMG6-212ENST00000573153 STUMQ69YW2 141 aa14.31□□□□□ -0.12
SMG6-212ENST00000573153 C12orf54Q6X4T0 127 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms