RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 RASSF4Q9H2L5 321 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 RGCCQ9H4X1 137 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 PPP1R3EQ9H7J1 279 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 GPR84Q9NQS5 396 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 UBAP1Q9NZ09 502 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 CNOT2Q9NZN8 540 aaKnown RBP11.26□□□□□ -0.61
CCDC40-205ENST00000571028 PLCE1Q9P212 2302 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 DYSFO75923 2080 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 A6NIN4 97 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 ANKRD30BLA7E2S9 258 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 B4DSR2 109 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 F5H5P2 479 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 MYL12BO14950 172 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 NCR1O76036 304 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 CDK1P06493 297 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 PIPP12273 146 aaPredicted RBP11.25□□□□□ -0.61
CCDC40-205ENST00000571028 TNFSF4P23510 183 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 EEF1B2P24534 225 aaKnown RBP11.25□□□□□ -0.61
CCDC40-205ENST00000571028 GIFP27352 417 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 GNALP38405 381 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 KIR3DL2P43630 455 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 GTF2A1P52655 376 aaPredicted RBP11.25□□□□□ -0.61
CCDC40-205ENST00000571028 NANOS3P60323 173 aaKnown RBP11.25□□□□□ -0.61
CCDC40-205ENST00000571028 MIDNQ504T8 468 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 SYS1Q8N2H4 156 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 PRSS35Q8N3Z0 413 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 OR13G1Q8NGZ3 307 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 OR2G2Q8NGZ5 317 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 UBASH3BQ8TF42 649 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 ITLN1Q8WWA0 313 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 PAPOLGQ9BWT3 736 aaKnown RBP11.25□□□□□ -0.61
CCDC40-205ENST00000571028 EGLN1Q9GZT9 426 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 OPA3Q9H6K4 179 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 ZNF696Q9H7X3 374 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 MOB1AQ9H8S9 216 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 SAP30LQ9HAJ7 183 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 PAK1IP1Q9NWT1 392 aaPredicted RBP11.25□□□□□ -0.61
CCDC40-205ENST00000571028 FRRS1LQ9P0K9 344 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 CAB39Q9Y376 341 aaPredicted RBP11.25□□□□□ -0.61
CCDC40-205ENST00000571028 RHBDD3Q9Y3P4 386 aa11.25□□□□□ -0.61
CCDC40-205ENST00000571028 A0A0U1RQV5 110 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 PNMA8CA0A1B0GUJ8 204 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 A0A1B0GVI7 797 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 TMPRSS2O15393 492 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 DENRO43583 198 aaKnown RBP11.24□□□□□ -0.61
CCDC40-205ENST00000571028 COL8A2P25067 703 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 ACKR3P25106 362 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 MAP2K3P46734 347 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 HILS1P60008 231 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 ALKBH1Q13686 389 aaKnown RBP11.24□□□□□ -0.61
CCDC40-205ENST00000571028 PCGF3Q3KNV8 242 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 AWAT1Q58HT5 328 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 DMRTC1Q5HYR2 192 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 SHISA2Q6UWI4 295 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 TEX29Q8N6K0 151 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 ZNF676Q8N7Q3 588 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 ZFP41Q8N8Y5 198 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 OR8S1Q8NH09 359 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 SLC30A2Q9BRI3 323 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 ADAT1Q9BUB4 502 aaKnown RBP11.24□□□□□ -0.61
CCDC40-205ENST00000571028 JAM3Q9BX67 310 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 FKBP14Q9NWM8 211 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 CGGBP1Q9UFW8 167 aaPredicted RBP11.24□□□□□ -0.61
CCDC40-205ENST00000571028 ZDHHC8Q9ULC8 765 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 ERGIC3Q9Y282 383 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 PIGLQ9Y2B2 252 aa11.24□□□□□ -0.61
CCDC40-205ENST00000571028 A0A1B0GTI1 187 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 LOC107986453A0A1B0GWG9 222 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 ZNF850A8MQ14 1090 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 MLNRO43193 412 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 SYT7O43581 403 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 RGS10O43665 173 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 MTRF1O75570 445 aaKnown RBP11.23□□□□□ -0.61
CCDC40-205ENST00000571028 MT-ND2P03891 347 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 CCDC159P0C7I6 412 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 FAHP16930 419 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 CRHBPP24387 322 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 DDOSTP39656 456 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 PRDX4Q13162 271 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 RBM48Q5RL73 367 aaKnown RBP11.23□□□□□ -0.61
CCDC40-205ENST00000571028 PRAMEF6Q5VXH4 476 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 XAF1Q6GPH4 301 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 USP43Q70EL4 1123 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 MOB3CQ70IA8 216 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 DOK3Q7L591 496 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 CSNK2A3Q8NEV1 391 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 RDH5Q92781 318 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 RNF166Q96A37 237 aaPredicted RBP11.23□□□□□ -0.61
CCDC40-205ENST00000571028 OR2V2Q96R30 315 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 DIRC2Q96SL1 478 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 HIF1ANQ9NWT6 349 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 BABAM2Q9NXR7 383 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 ZNF391Q9UJN7 358 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 CACNG2Q9Y698 323 aa11.23□□□□□ -0.61
CCDC40-205ENST00000571028 IGHV1-69-2A0A0G2JMI3 117 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 TRBV2A0A0J9YWF9 115 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 DHRS3O75911 302 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 GRPP07492 148 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 EPHA1P21709 976 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 MAP2K4P45985 399 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms