RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 TMEM186Q96B77 213 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 SOX7Q9BT81 388 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 ALG8Q9BVK2 526 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 SHARPINQ9H0F6 387 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 RNPEPL1Q9HAU8 725 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 DCAF16Q9NXF7 216 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 AASSQ9UDR5 926 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 PIGLQ9Y2B2 252 aa10.93□□□□□ -0.66
CLK3-224ENST00000568605 NIPBLQ6KC79 2804 aaeCLIP10.92□□□□□ -0.66
CLK3-224ENST00000568605 ZNF850A8MQ14 1090 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 FAM157AC9JC47 383 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 J3QRE1 110 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 P2RY10O00398 339 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 SYT7O43581 403 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 FOXH1O75593 365 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 IGHA1P01876 353 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 RPSAP08865 295 aaKnown RBP10.92□□□□□ -0.66
CLK3-224ENST00000568605 HTR1AP08908 422 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 MYL12AP19105 171 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 ISL1P61371 349 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 ADARB1P78563 741 aaKnown RBP10.92□□□□□ -0.66
CLK3-224ENST00000568605 ZNF154Q13106 437 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 MPPED2Q15777 294 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 ESCO2Q56NI9 601 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 PLCXD3Q63HM9 321 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 ZNF771Q7L3S4 317 aaPredicted RBP10.92□□□□□ -0.66
CLK3-224ENST00000568605 SYS1Q8N2H4 156 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 OR1M1Q8NGA1 313 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 OR5P3Q8WZ94 311 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 PATZ1Q9HBE1 687 aaKnown RBP10.92□□□□□ -0.66
CLK3-224ENST00000568605 AMBNQ9NP70 447 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 MRPS18AQ9NVS2 196 aaKnown RBP10.92□□□□□ -0.66
CLK3-224ENST00000568605 C1orf123Q9NWV4 160 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 MIOXQ9UGB7 285 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 LRCH1Q9Y2L9 728 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 NAV3Q8IVL0 2385 aa10.92□□□□□ -0.66
CLK3-224ENST00000568605 TRAV38-1A0A0B4J264 116 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 A0A0G2JMP0 313 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 A0A0X1KG70 313 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 CEACAM18A8MTB9 384 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 CRLF1O75462 422 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 WBP4O75554 376 aaKnown RBP10.91□□□□□ -0.66
CLK3-224ENST00000568605 CLIC3O95833 236 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 FAHP16930 419 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 CCL1P22362 96 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 GATA3P23771 443 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 GNG3P63215 75 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 GALEQ14376 348 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 CEACAM21Q3KPI0 293 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 ZNF404Q494X3 552 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 WDR38Q5JTN6 314 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 TMEM244Q5VVB8 128 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 DCDC5Q6ZRR9 648 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 OR4M2Q8NGB6 313 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 OR8B3Q8NGG8 313 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 CNIH3Q8TBE1 160 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 RNF170Q96K19 258 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 C4orf36Q96KX1 117 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 TECTBQ96PL2 329 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 OR8B2Q96RD0 313 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 JAM3Q9BX67 310 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 BEX2Q9BXY8 128 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 LPAR2Q9HBW0 351 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 HIF1ANQ9NWT6 349 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 SLC22A13Q9Y226 551 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 V9GYS6 101 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 NF1P21359 2839 aa10.91□□□□□ -0.66
CLK3-224ENST00000568605 LOC107986453A0A1B0GWG9 222 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 OOEPA6NGQ2 149 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 A8MXK9 166 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 H0YJX3 145 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 J3QLW9 94 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 LGALS8O00214 317 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 NDUFA2O43678 99 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 GATBO75879 557 aaKnown RBP10.9□□□□□ -0.66
CLK3-224ENST00000568605 NRASP01111 189 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 CCDC159P0C7I6 412 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 ZNF19P17023 458 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 DCKP27707 260 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 CCR9P51686 369 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 OR12D2P58182 307 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 ODF4Q2M2E3 257 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 CR1LQ2VPA4 569 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 CEP78Q5JTW2 689 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 CLVS2Q5SYC1 327 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 FDX2Q6P4F2 183 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 Q6ZSR3 168 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 KRT74Q7RTS7 529 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 LHFPL3Q86UP9 236 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 BOLLQ8N9W6 283 aaKnown RBP10.9□□□□□ -0.66
CLK3-224ENST00000568605 OR5A2Q8NGI9 324 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 OR52I1Q8NGK6 324 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 OR10Z1Q8NGY1 313 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 OR2G2Q8NGZ5 317 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 LRRC29Q8WV35 223 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 HPSE2Q8WWQ2 592 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 C10orf35Q96D05 121 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 NEIL1Q96FI4 390 aaPredicted RBP10.9□□□□□ -0.66
CLK3-224ENST00000568605 TLNRD1Q9H1K6 362 aa10.9□□□□□ -0.66
CLK3-224ENST00000568605 FGF20Q9NP95 211 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms