RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 SOCS1O15524 211 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 ACTL6AO96019 429 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 FCGR2AP12318 317 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 SLC10A1Q14973 349 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 STK11Q15831 433 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 PLAC9Q5JTB6 97 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 C1QL2Q7Z5L3 287 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 OR56B1Q8NGI3 324 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 OR2T35Q8NGX2 323 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 ALX4Q9H161 411 aaPredicted RBP15.81■□□□□ 0.12
SMPD3-211ENST00000568373 ASCL3Q9NQ33 180 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 IFT46Q9NQC8 304 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 ZNF391Q9UJN7 358 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 KCNK7Q9Y2U2 307 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 DCHS1Q96JQ0 3298 aa15.81■□□□□ 0.12
SMPD3-211ENST00000568373 RPL36A-HNRNPH2H7BZ11 118 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 SSX5O60225 188 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 ZNF780AO75290 641 aaPredicted RBP15.8■□□□□ 0.12
SMPD3-211ENST00000568373 HIST1H1DP16402 221 aaKnown RBP15.8■□□□□ 0.12
SMPD3-211ENST00000568373 DNASE1P24855 282 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 RIPPLY1Q0D2K3 151 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 RNASE10Q5GAN6 216 aaKnown RBP15.8■□□□□ 0.12
SMPD3-211ENST00000568373 VASH2Q86V25 355 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 TNFAIP8L1Q8WVP5 186 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 PIGTQ969N2 578 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 SLC6A7Q99884 636 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 CA10Q9NS85 328 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 SLC2A8Q9NY64 477 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 ASPMQ8IZT6 3477 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 PTPRZ1P23471 2315 aaPredicted RBP15.8■□□□□ 0.12
SMPD3-211ENST00000568373 DISC1C4P0D8 188 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 TMEM50BP56557 158 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 GNG2P59768 71 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 RPS27AP62979 156 aaKnown RBP15.8■□□□□ 0.12
SMPD3-211ENST00000568373 ARF1P84077 181 aaKnown RBP15.8■□□□□ 0.12
SMPD3-211ENST00000568373 C3AR1Q16581 482 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 ZNF766Q5HY98 468 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 OR52W1Q6IF63 320 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 SPSB1Q96BD6 273 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 CHST6Q9GZX3 395 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 POFUT1Q9H488 388 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 RGCCQ9H4X1 137 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 ZNF552Q9H707 407 aaPredicted RBP15.8■□□□□ 0.12
SMPD3-211ENST00000568373 LIPGQ9Y5X9 500 aa15.8■□□□□ 0.12
SMPD3-211ENST00000568373 GVINP1Q7Z2Y8 2422 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 TMEM82A0PJX8 343 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 OR14I1A6ND48 311 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 ZNF587BE7ETH6 402 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 G3V3Q6 166 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 MPZP25189 248 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 RNPS1Q15287 305 aaKnown RBP15.79■□□□□ 0.12
SMPD3-211ENST00000568373 PABPC1L2AQ5JQF8 200 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 FAM89BQ8N5H3 189 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 CCDC107Q8WV48 283 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 PRRT1Q99946 306 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 GPR173Q9NS66 373 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 CSN2P05814 226 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 GIPP09681 153 aaPredicted RBP15.79■□□□□ 0.12
SMPD3-211ENST00000568373 LIPCP11150 499 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 MGMTP16455 207 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 TBPP20226 339 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 NKPD1Q17RQ9 610 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 SCGB2B2Q4G0G5 96 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 ASCL5Q7RTU5 278 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 CD163Q86VB7 1156 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 MUC20Q8N307 709 aaPredicted RBP15.79■□□□□ 0.12
SMPD3-211ENST00000568373 TMEM178AQ8NBL3 297 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 OR13C8Q8NGS7 320 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 GRPEL2Q8TAA5 225 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 S100A13Q99584 98 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 CHIAQ9BZP6 476 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 PIPOXQ9P0Z9 390 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 ATPIF1Q9UII2 106 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 PLEKHA6Q9Y2H5 1048 aa15.79■□□□□ 0.12
SMPD3-211ENST00000568373 CNOT1A5YKK6 2376 aaKnown RBP15.78■□□□□ 0.12
SMPD3-211ENST00000568373 FAM186AA6NE01 2351 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 MFNGO00587 321 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 NKX2-8O15522 239 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 OR2A4O95047 310 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 ZNF24P17028 368 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 ZMYND11Q15326 602 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 PNLIPRP3Q17RR3 467 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 C4orf46Q504U0 113 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 CPEB3Q8NE35 698 aaKnown RBP15.78■□□□□ 0.12
SMPD3-211ENST00000568373 OR51T1Q8NGJ9 327 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 APH1AQ96BI3 265 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 ARHGAP5-AS1Q96IT6 56 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 OR2A7Q96R45 310 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 DEFB127Q9H1M4 99 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 LDAHQ9H6V9 325 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 MYOZ1Q9NP98 299 aaPredicted RBP15.78■□□□□ 0.12
SMPD3-211ENST00000568373 ANAPC10Q9UM13 185 aa15.78■□□□□ 0.12
SMPD3-211ENST00000568373 SERPINA2P20848 420 aa15.77■□□□□ 0.12
SMPD3-211ENST00000568373 HRH1P35367 487 aa15.77■□□□□ 0.12
SMPD3-211ENST00000568373 CXADRP78310 365 aa15.77■□□□□ 0.12
SMPD3-211ENST00000568373 RNFT1Q5M7Z0 435 aa15.77■□□□□ 0.12
SMPD3-211ENST00000568373 ATPAF1Q5TC12 328 aaPredicted RBP15.77■□□□□ 0.12
SMPD3-211ENST00000568373 C9orf135Q5VTT2 229 aa15.77■□□□□ 0.12
SMPD3-211ENST00000568373 STEAP2Q8NFT2 490 aa15.77■□□□□ 0.12
SMPD3-211ENST00000568373 GPR137Q96N19 417 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms