RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	SLC22A20	A6NK97	555 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	MEIS3P2	A8K0S8	358 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	KIR2DS4	P43632	304 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	PLP1	P60201	277 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	ERVFRD-1	P60508	538 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	KIR2DS1	Q14954	304 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	TESK1	Q15569	626 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	NME2P1	O60361	137 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	RAC2	P15153	192 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	PRRT3	Q5FWE3	981 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	OR4N2	Q8NGD1	307 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	DAZL	Q92904	295 aa	Known RBP	3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	NMNAT3	Q96T66	252 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	HS3ST2	Q9Y278	367 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	MRPS17	Q9Y2R5	130 aa	Known RBP	3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	DOT1L	Q8TEK3	1739 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	TRBV9	A0A0B4J1U6	114 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	FAM157C	P0CG43	387 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	CEACAM6	P40199	344 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	NPBWR1	P48145	328 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	OR4A47	Q6IF82	309 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	NHLRC1	Q6VVB1	395 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	GPRIN1	Q7Z2K8	1008 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	PELI1	Q96FA3	418 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	RHOV	Q96L33	236 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	LYRM4	Q9HD34	91 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	WBP1L	Q9NX94	342 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	NAT8B	Q9UHF3	227 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	SLC35E2	P0CK97	266 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	PCBD1	P61457	104 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	WDFY1	Q8IWB7	410 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	C2orf73	Q8N5S3	287 aa	Predicted RBP	3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	PTRH2	Q9Y3E5	179 aa	Known RBP	3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	DDN	O94850	711 aa	Predicted RBP	3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	ALOX5AP	P20292	161 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	LINC01559	Q495D7	138 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	NBPF12	Q5TAG4	269 aa	Predicted RBP	3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	SLC35A4	Q96G79	324 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	RHNO1	Q9BSD3	238 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	OR10A5	Q9H207	317 aa		3.84	□□□□□ -1.8
MACF1-231	ENST00000564288	PCM1	Q15154	2024 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	NPIPB13	A6NJU9	1138 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	C4orf47	A7E2U8	309 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	NPIPB4	C9JG80	1138 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	CHRNB4	P30926	498 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	SNU13	P55769	128 aa	Known RBP	3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	SNRPN	P63162	240 aa	Known RBP	3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	CTSL3P	Q5NE16	218 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288		Q6ZVU0	165 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	NANOS1	Q8WY41	292 aa	Known RBP	3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	EID2B	Q96D98	161 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	PGAM5	Q96HS1	289 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	PBX4	Q9BYU1	374 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	PMS2P1	A4D2B8	440 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	OR51A2	Q8NGJ7	313 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	DERL3	Q96Q80	235 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	RPS26	P62854	115 aa	Known RBP	3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	GDF6	Q6KF10	455 aa	Predicted RBP	3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	GPR32P1	Q8NGA4	272 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	NXT1	Q9UKK6	140 aa	Known RBP	3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	RHBDD3	Q9Y3P4	386 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	RTCA	O00442	366 aa	Known RBP	3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	WISP3	O95389	354 aa	Predicted RBP	3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	IRF1	P10914	325 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	ISOC2	Q96AB3	205 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	HINT3	Q9NQE9	182 aa	Known RBP	3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	DBH	P09172	617 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	VSIG10L2	P0DP72	767 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	TIMP2	P16035	220 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	CLEC4E	Q9ULY5	219 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	APBA3	O96018	575 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	TNFSF4	P23510	183 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	CST5	P28325	142 aa	Predicted RBP	3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	ACTR1A	P61163	376 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	NCR3LG1	Q68D85	454 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	SLC39A5	Q6ZMH5	540 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	BOC	Q9BWV1	1114 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	PLSCR2	Q9NRY7	297 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	B4GALT3	O60512	393 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	SNAI1	O95863	264 aa	Predicted RBP	3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	CNN1	P51911	297 aa	Known RBP	3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	TMEM156	Q8N614	296 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	TNFRSF14	Q92956	283 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	CLEC18A	A5D8T8	446 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	FCN1	O00602	326 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	PGBD5	Q8N414	524 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	CLEC18C	Q8NCF0	446 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	OR52B4	Q8NGK2	314 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	GALNT14	Q96FL9	552 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	ZNF385A	Q96PM9	386 aa	Known RBP	3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	ROS1	P08922	2347 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	VSTM5	A8MXK1	200 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288		H0Y8G0	127 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	LCAT	P04180	440 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	SLC6A12	P48065	614 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	KIAA1456	Q9P272	454 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	PPP1R1A	Q13522	171 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	OTOP2	Q7RTS6	562 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	SDSL	Q96GA7	329 aa		3.83	□□□□□ -1.8
MACF1-231	ENST00000564288	NKX3-1	Q99801	234 aa	Predicted RBP	3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms