RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TP53I11O14683 189 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 RRP8O43159 456 aaKnown RBP11.51□□□□□ -0.57
USB1-207ENST00000563149 MBTPS2O43462 519 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 ADAP1O75689 374 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 OR2J2O76002 312 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 MSR1P21757 451 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 ZNF84P51523 738 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 SNU13P55769 128 aaKnown RBP11.51□□□□□ -0.57
USB1-207ENST00000563149 PJVKQ0ZLH3 352 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 GFOD2Q3B7J2 385 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 ANKRD55Q3KP44 614 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 ZNF385CQ66K41 422 aaPredicted RBP11.51□□□□□ -0.57
USB1-207ENST00000563149 DHRS7BQ6IAN0 325 aaPredicted RBP11.51□□□□□ -0.57
USB1-207ENST00000563149 ZNF585AQ6P3V2 769 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 ZNF574Q6ZN55 896 aaPredicted RBP11.51□□□□□ -0.57
USB1-207ENST00000563149 TMPPEQ6ZT21 453 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 SPAG16Q8N0X2 631 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 PUSL1Q8N0Z8 303 aaKnown RBP11.51□□□□□ -0.57
USB1-207ENST00000563149 ADAMTS17Q8TE56 1095 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 SPACA9Q96E40 222 aaPredicted RBP11.51□□□□□ -0.57
USB1-207ENST00000563149 OR6C1Q96RD1 312 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 SLC5A7Q9GZV3 580 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 ZNF160Q9HCG1 818 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 C1orf123Q9NWV4 160 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 C14orf166Q9Y224 244 aaKnown RBP11.51□□□□□ -0.57
USB1-207ENST00000563149 MYO9BQ13459 2157 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 A0A1W2PP11 408 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 ZNF814B7Z6K7 855 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 F8W036 122 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 MTRF1O75570 445 aaKnown RBP11.51□□□□□ -0.57
USB1-207ENST00000563149 DHRS3O75911 302 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 SNAPINO95295 136 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 RPS2P15880 293 aaKnown RBP11.51□□□□□ -0.57
USB1-207ENST00000563149 CPT2P23786 658 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 BLVRBP30043 206 aaPredicted RBP11.51□□□□□ -0.57
USB1-207ENST00000563149 HIST1H3AP68431 136 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 BLOC1S1P78537 153 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 TMEM176BQ3YBM2 270 aaPredicted RBP11.51□□□□□ -0.57
USB1-207ENST00000563149 HIST2H3PS2Q5TEC6 136 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 HIST2H3AQ71DI3 136 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 TMED6Q8WW62 240 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 TMEM54Q969K7 222 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 SMIM8Q96KF7 97 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 S100A13Q99584 98 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 SPSB2Q99619 263 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 MESP1Q9BRJ9 268 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 ST6GALNAC5Q9BVH7 336 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 DEFB126Q9BYW3 111 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 NELFAQ9H3P2 528 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 HPF1Q9NWY4 346 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 EHFQ9NZC4 300 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 OR5AC2Q9NZP5 309 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 LPAR3Q9UBY5 353 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 PCDHGA1Q9Y5H4 931 aa11.51□□□□□ -0.57
USB1-207ENST00000563149 SIGLEC5O15389 551 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 VAMP5O95183 116 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 ACTL6AO96019 429 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 MYF5P13349 255 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 CSNK1A1P48729 337 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 CLDN17P56750 224 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 SIGLEC14Q08ET2 396 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 RAB32Q13637 225 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 CHRFAM7AQ494W8 412 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 HAGHLQ6PII5 290 aaPredicted RBP11.5□□□□□ -0.57
USB1-207ENST00000563149 CRIP3Q6Q6R5 217 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 LDLRAD3Q86YD5 345 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 WDSUB1Q8N9V3 476 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 HAS2Q92819 552 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 INTS12Q96CB8 462 aaKnown RBP11.5□□□□□ -0.57
USB1-207ENST00000563149 ZC3H10Q96K80 434 aaKnown RBP11.5□□□□□ -0.57
USB1-207ENST00000563149 OR10C1Q96KK4 312 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 LYZL4Q96KX0 146 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 RASL10BQ96S79 203 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 CRB3Q9BUF7 120 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 ZNF576Q9H609 170 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 EDARQ9UNE0 448 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 KLF2Q9Y5W3 355 aaPredicted RBP11.5□□□□□ -0.57
USB1-207ENST00000563149 CEP192Q8TEP8 1941 aa11.5□□□□□ -0.57
USB1-207ENST00000563149 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 MSGN1A6NI15 193 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 STMND1H3BQB6 276 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 GPR31O00270 319 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 EIF1BO60739 113 aaKnown RBP11.49□□□□□ -0.57
USB1-207ENST00000563149 TIAF1O95411 115 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 ADCYAP1P18509 176 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 GLRA1P23415 457 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 OTX1P32242 354 aaPredicted RBP11.49□□□□□ -0.57
USB1-207ENST00000563149 SFTPDP35247 375 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 ARHGDIBP52566 201 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 H3F3AP84243 136 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 MST1LQ2TV78 715 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 BOLLQ8N9W6 283 aaKnown RBP11.49□□□□□ -0.57
USB1-207ENST00000563149 DUSP23Q9BVJ7 150 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 CHST5Q9GZS9 411 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 UQCC1Q9NVA1 299 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 SEC16AO15027 2179 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 ZNF705EA8MWA4 302 aaPredicted RBP11.49□□□□□ -0.57
USB1-207ENST00000563149 KCNAB3O43448 404 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 RAMP1O60894 148 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 IFNA2P01563 188 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms