RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 FAM27BQ5VT28 67 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 KLC3Q6P597 504 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 C16orf62Q7Z3J2 963 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 CCDC91Q7Z6B0 441 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 ZNF429Q86V71 674 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 MKXQ8IYA7 352 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 GCSAMQ8N6F7 178 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 FAM216BQ8N7L0 139 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 ZNF114Q8NC26 417 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 NPEPL1Q8NDH3 523 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 OR11L1Q8NGX0 322 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 FBXO25Q8TCJ0 367 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 SFXN5Q8TD22 340 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 RPS4Y2Q8TD47 263 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 ST6GALNAC6Q969X2 333 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 MOAP1Q96BY2 351 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 MTERF3Q96E29 417 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 MALSU1Q96EH3 234 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 SLC25A44Q96H78 314 aaPredicted RBP2.85□□□□□ -1.95
HERC1-211ENST00000560983 METTL2AQ96IZ6 378 aaKnown RBP2.85□□□□□ -1.95
HERC1-211ENST00000560983 MS4A14Q96JA4 679 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 ZNF583Q96ND8 569 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 ZNF582Q96NG8 517 aaPredicted RBP2.85□□□□□ -1.95
HERC1-211ENST00000560983 SEPHS2Q99611 448 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 ATF6BQ99941 703 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 ECSITQ9BQ95 431 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 MRPL13Q9BYD1 178 aaKnown RBP2.85□□□□□ -1.95
HERC1-211ENST00000560983 SLC38A1Q9H2H9 487 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 OR51I1Q9H343 314 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 MTHFD2LQ9H903 347 aaPredicted RBP2.85□□□□□ -1.95
HERC1-211ENST00000560983 LIN7CQ9NUP9 197 aaKnown RBP2.85□□□□□ -1.95
HERC1-211ENST00000560983 TMEM100Q9NV29 134 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 MRPL39Q9NYK5 338 aaKnown RBP2.85□□□□□ -1.95
HERC1-211ENST00000560983 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.85□□□□□ -1.95
HERC1-211ENST00000560983 TXNDC16Q9P2K2 825 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.85□□□□□ -1.95
HERC1-211ENST00000560983 TMCO1Q9UM00 188 aa2.85□□□□□ -1.95
HERC1-211ENST00000560983 TRAV36DV7A0A075B6V5 113 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 MAGEA13PA6NCF6 341 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 IQCF6A8MYZ5 107 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 H3BSH0 61 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.84□□□□□ -1.95
HERC1-211ENST00000560983 CCRL2O00421 344 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 NDUFB3O43676 98 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 SMIM24O75264 130 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 SERPINI2O75830 405 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 SUPT7LO94864 414 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 RBMY1CP0DJD4 496 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 ETFAP13804 333 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 SELLP14151 372 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 UQCRBP14927 111 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 NQO1P15559 274 aaKnown RBP2.84□□□□□ -1.95
HERC1-211ENST00000560983 IL7RP16871 459 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 GGT2P36268 569 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 CDX1P47902 265 aaPredicted RBP2.84□□□□□ -1.95
HERC1-211ENST00000560983 ARL4CP56559 192 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 COPZ1P61923 177 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 MRPS34P82930 218 aaKnown RBP2.84□□□□□ -1.95
HERC1-211ENST00000560983 HOXC5Q00444 222 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 MAPK11Q15759 364 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 SYPL1Q16563 259 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 DGUOKQ16854 277 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 WDR38Q5JTN6 314 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 C10orf128Q5T292 105 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 ATPAF1Q5TC12 328 aaPredicted RBP2.84□□□□□ -1.95
HERC1-211ENST00000560983 FBXW12Q6X9E4 464 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 ZCCHC23Q6ZST2 131 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 ZNF826PQ6ZT77 177 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 C3orf62Q6ZUJ4 267 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 SLC35D2Q76EJ3 337 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 SERPINA11Q86U17 422 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 LYPD6Q86Y78 171 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 C11orf53Q8IXP5 236 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 KLHL7Q8IXQ5 586 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 ZNF440Q8IYI8 595 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 ZNF645Q8N7E2 425 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 ANKFN1Q8N957 763 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 OR5D13Q8NGL4 314 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 OR4Q3Q8NH05 313 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 OR8U1Q8NH10 309 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 OR6S1Q8NH40 331 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 C2CD4CQ8TF44 421 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 CDKL2Q92772 493 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 SEH1LQ96EE3 360 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 NOL4LQ96MY1 436 aaPredicted RBP2.84□□□□□ -1.95
HERC1-211ENST00000560983 TMEM237Q96Q45 408 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 CDRT15Q96T59 188 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 CCT7Q99832 543 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 BAG1Q99933 345 aaPredicted RBP2.84□□□□□ -1.95
HERC1-211ENST00000560983 DPY30Q9C005 99 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 MEAF6Q9HAF1 191 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 CCNB1IP1Q9NPC3 277 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 SLCO1B3Q9NPD5 702 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 ABCB10Q9NRK6 738 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 TAS2R5Q9NYW4 299 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 STK38LQ9Y2H1 464 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 ADAM18Q9Y3Q7 739 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 TIMM10BQ9Y5J6 103 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 LRP2P98164 4655 aa2.84□□□□□ -1.95
HERC1-211ENST00000560983 LRP1Q07954 4544 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms