RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 MECP2P51608 486 aaKnown RBP15.49■□□□□ 0.07
SNX1-208ENST00000559844 RBMS2Q15434 407 aaKnown RBP15.49■□□□□ 0.07
SNX1-208ENST00000559844 TSPO2Q5TGU0 170 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 ZNF774Q6NX45 483 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 GLIPR1L1Q6UWM5 242 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 CHMP1BQ7LBR1 199 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 KCNG3Q8TAE7 436 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 SSC4DQ8WTU2 575 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 CAPSLQ8WWF8 208 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 AQP3Q92482 292 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 GPER1Q99527 375 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 CHST5Q9GZS9 411 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 PRDM14Q9GZV8 571 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 GHRLQ9UBU3 117 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 ZNF391Q9UJN7 358 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 C5orf63A6NC05 138 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 RPL36A-HNRNPH2H7BZ11 118 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 RAB27BO00194 218 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 ICMTO60725 284 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 C1QL1O75973 258 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 HTR5AP47898 357 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 MOGAT2Q3SYC2 334 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 ZNF260Q3ZCT1 412 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 FAAP20Q6NZ36 180 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 STEAP1BQ6NZ63 245 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 GABRG1Q8N1C3 465 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 ST6GALNAC3Q8NDV1 305 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 MED30Q96HR3 178 aa15.49■□□□□ 0.07
SNX1-208ENST00000559844 VEGFCP49767 419 aa15.48■□□□□ 0.07
SNX1-208ENST00000559844 PSG4Q00888 419 aa15.48■□□□□ 0.07
SNX1-208ENST00000559844 TLE1Q04724 770 aa15.48■□□□□ 0.07
SNX1-208ENST00000559844 RBPJQ06330 500 aa15.48■□□□□ 0.07
SNX1-208ENST00000559844 SKA3Q8IX90 412 aa15.48■□□□□ 0.07
SNX1-208ENST00000559844 TUSC5Q8IXB3 177 aa15.48■□□□□ 0.07
SNX1-208ENST00000559844 FAM57AQ8TBR7 257 aa15.48■□□□□ 0.07
SNX1-208ENST00000559844 SGK3Q96BR1 496 aa15.48■□□□□ 0.07
SNX1-208ENST00000559844 WNT5BQ9H1J7 359 aa15.48■□□□□ 0.07
SNX1-208ENST00000559844 GPN1Q9HCN4 374 aaPredicted RBP15.48■□□□□ 0.07
SNX1-208ENST00000559844 ATPIF1Q9UII2 106 aa15.48■□□□□ 0.07
SNX1-208ENST00000559844 FLVCR2Q9UPI3 526 aa15.48■□□□□ 0.07
SNX1-208ENST00000559844 PIGLQ9Y2B2 252 aa15.48■□□□□ 0.07
SNX1-208ENST00000559844 ARHGAP21Q5T5U3 1957 aa15.48■□□□□ 0.07
SNX1-208ENST00000559844 IGKV1-9A0A0C4DH69 117 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 MEIS3P1A6NDR6 274 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 ZNF587BE7ETH6 402 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 IL5P05113 134 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 MELTFP08582 738 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 GZMKP49863 264 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 SNAI3Q3KNW1 292 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 ZNF585AQ6P3V2 769 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 Q6ZTK2 550 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 CD163Q86VB7 1156 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 MCEMP1Q8IX19 187 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 CHST4Q8NCG5 386 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 SEMA6DQ8NFY4 1073 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 AKR7LQ8NHP1 331 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 RGCCQ9H4X1 137 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 CALHM2Q9HA72 323 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 SSNA1O43805 119 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 CYB5AP00167 134 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 LCATP04180 440 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 ANXA3P12429 323 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 OR3A4PP47883 348 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 GLDNQ6ZMI3 551 aaPredicted RBP15.47■□□□□ 0.07
SNX1-208ENST00000559844 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.47■□□□□ 0.07
SNX1-208ENST00000559844 OR11H7Q8NGC8 314 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 OR10R2Q8NGX6 335 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 FNDC9Q8TBE3 224 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 SPACA5Q96QH8 159 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 SLC7A10Q9NS82 523 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 ZNF224Q9NZL3 707 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 ZNF222Q9UK12 451 aa15.47■□□□□ 0.07
SNX1-208ENST00000559844 FAM172BPA6NC97 362 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 TMEM235A6NFC5 223 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 CD3DP04234 171 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 SULT1A3P0DMM9 295 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 SULT1A4P0DMN0 295 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 FAHP16930 419 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 ALDH3B1P43353 468 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 FAPQ12884 760 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 KISS1Q15726 138 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 CDNFQ49AH0 187 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 PLXDC2Q6UX71 529 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 ZNF584Q8IVC4 421 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 APH1AQ96BI3 265 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 REEP6Q96HR9 211 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 C1orf147Q96MC9 270 aaPredicted RBP15.46■□□□□ 0.07
SNX1-208ENST00000559844 URM1Q9BTM9 101 aaKnown RBP15.46■□□□□ 0.07
SNX1-208ENST00000559844 CST11Q9H112 138 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 POLEQ07864 2286 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 MED12LQ86YW9 2145 aa15.46■□□□□ 0.07
SNX1-208ENST00000559844 PRRG2O14669 202 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 CDC14BO60729 498 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 RAB3DO95716 219 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 MMP7P09237 267 aaPredicted RBP15.45■□□□□ 0.06
SNX1-208ENST00000559844 RIPPLY1Q0D2K3 151 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 ESPL1Q14674 2120 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 CDK10Q15131 360 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 SFRP5Q5T4F7 317 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 BEST4Q8NFU0 473 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms