RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 C12orf43Q96C57 262 aaKnown RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 ITPKCQ96DU7 683 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 NEIL1Q96FI4 390 aaPredicted RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 RNF170Q96K19 258 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 TECTBQ96PL2 329 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 JMJD8Q96S16 334 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 TBX5Q99593 518 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 APOL4Q9BPW4 351 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 TMEM246Q9BRR3 403 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 TTTY10Q9BZA0 68 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 VCXQ9H320 206 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 METTL17Q9H7H0 456 aaPredicted RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 PLEKHA1Q9HB21 404 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 ADGRL4Q9HBW9 690 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 TMEM165Q9HC07 324 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 GPR84Q9NQS5 396 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 C1orf123Q9NWV4 160 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 FAM206AQ9NX38 181 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 DCAF16Q9NXF7 216 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 DNAJB11Q9UBS4 358 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 NUFIP1Q9UHK0 495 aaKnown RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 ENPP5Q9UJA9 477 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 COPS3Q9UNS2 423 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 PIGLQ9Y2B2 252 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 KLHDC2Q9Y2U9 406 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 POLR3KQ9Y2Y1 108 aaPredicted RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 RHBDD3Q9Y3P4 386 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 AUP1Q9Y679 476 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 R4GMQ9 66 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.67□□□□□ -1.824e-15■■■■■ 30.4
SNX1-205ENST00000559339 ATRQ13535 2644 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 LOC105371242A0A075B767 164 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 LOC100130705A0A1B0GUX0 176 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 A0A1B0GVI7 797 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 IRGMA1A4Y4 181 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 C5orf63A6NC05 138 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 OR5B21A6NL26 309 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 DHRS7CA6NNS2 312 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 RNF212BA8MTL3 300 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 KIAA1324LA8MWY0 1029 aaPredicted RBP3.66□□□□□ -1.82
SNX1-205ENST00000559339 A8MXK9 166 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 LGALS8O00214 317 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 DLGAP1O14490 977 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 ADAM20O43506 726 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 SYT7O43581 403 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 ENSAO43768 121 aaKnown RBP3.66□□□□□ -1.82
SNX1-205ENST00000559339 RPP14O95059 124 aaKnown RBP3.66□□□□□ -1.82
SNX1-205ENST00000559339 ECDO95905 644 aaPredicted RBP3.66□□□□□ -1.82
SNX1-205ENST00000559339 NRASP01111 189 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 LHBP01229 141 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 OCM2P0CE71 109 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 OCMP0CE72 109 aaPredicted RBP3.66□□□□□ -1.82
SNX1-205ENST00000559339 PPIAL4GP0DN37 164 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 EPHA1P21709 976 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 ACKR3P25106 362 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 ZFP36P26651 326 aaKnown RBP3.66□□□□□ -1.82
SNX1-205ENST00000559339 CFHR2P36980 270 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 PMELP40967 661 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 GPM6AP51674 278 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 SNRPGP62308 76 aaKnown RBP3.66□□□□□ -1.82
SNX1-205ENST00000559339 GNG3P63215 75 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 PRR20EP86478 221 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 PRR20CP86479 221 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 PRR20DP86480 221 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 PRR20BP86481 221 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 PRR20AP86496 221 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 RAB40BQ12829 278 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 ZNF154Q13106 437 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 LRRC36Q1X8D7 754 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 KLHL22Q53GT1 634 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 OXLD1Q5BKU9 147 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 LRRC10Q5BKY1 277 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 FAM76BQ5HYJ3 339 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 CEP78Q5JTW2 689 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 CLVS2Q5SYC1 327 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 PLCXD3Q63HM9 321 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 MOB3CQ70IA8 216 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 DOK3Q7L591 496 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 ZNF573Q86YE8 665 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 EGFL6Q8IUX8 553 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 ELMOD2Q8IZ81 293 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 BPIFB2Q8N4F0 458 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 GCSAMQ8N6F7 178 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 ACBD7Q8N6N7 88 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 PNLDC1Q8NA58 520 aaKnown RBP3.66□□□□□ -1.82
SNX1-205ENST00000559339 CCDC54Q8NEL0 328 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 DEFB108BQ8NET1 73 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 ZNF671Q8TAW3 534 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 HAVCR2Q8TDQ0 301 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 LRRC29Q8WV35 223 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 RAB40AQ8WXH6 277 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 OR5P3Q8WZ94 311 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 C10orf35Q96D05 121 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 RNFT2Q96EX2 444 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 FAM71F1Q96KD3 344 aaPredicted RBP3.66□□□□□ -1.82
SNX1-205ENST00000559339 LYZL4Q96KX0 146 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 RDH12Q96NR8 316 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 TMPRSS13Q9BYE2 586 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 NEK6Q9HC98 313 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms