RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 ZNF629Q9UEG4 869 aaPredicted RBP14.58□□□□□ -0.08
SPG11-215ENST00000559193 RALGAPA1Q6GYQ0 2036 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 ZNF726A6NNF4 738 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 BCAT2O15382 392 aaPredicted RBP14.58□□□□□ -0.08
SPG11-215ENST00000559193 IGLV3-1P01715 115 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 OR3A2P47893 321 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 DCDP81605 110 aaKnown RBP14.58□□□□□ -0.08
SPG11-215ENST00000559193 ACY1Q03154 408 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 SCRN3Q0VDG4 424 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 RAB32Q13637 225 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 FAM189A2Q15884 450 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 C10orf91Q5T1B1 145 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 ZNF585AQ6P3V2 769 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 TMEM88Q6PEY1 159 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 DRAM2Q6UX65 266 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 SPSB2Q99619 263 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 HPF1Q9NWY4 346 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 EHFQ9NZC4 300 aa14.58□□□□□ -0.08
SPG11-215ENST00000559193 DKK1O94907 266 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 H2AFB1P0C5Y9 115 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 PTGFRP43088 359 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 AFF3P51826 1226 aaKnown RBP14.57□□□□□ -0.08
SPG11-215ENST00000559193 CLDN17P56750 224 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 ECH1Q13011 328 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 ZNF385CQ66K41 422 aaPredicted RBP14.57□□□□□ -0.08
SPG11-215ENST00000559193 LCN10Q6JVE6 187 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 TMEM200AQ86VY9 491 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 PNLDC1Q8NA58 520 aaKnown RBP14.57□□□□□ -0.08
SPG11-215ENST00000559193 RHBDD1Q8TEB9 315 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 PGAM5Q96HS1 289 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 RASL10BQ96S79 203 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 ZNF576Q9H609 170 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 TOX3O15405 576 aaPredicted RBP14.57□□□□□ -0.08
SPG11-215ENST00000559193 TAS2R46P59540 309 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 FLI1Q01543 452 aaPredicted RBP14.57□□□□□ -0.08
SPG11-215ENST00000559193 IL15RAQ13261 267 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 SHBQ15464 509 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 FADS6Q8N9I5 356 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 OR10Z1Q8NGY1 313 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 SLC22A8Q8TCC7 542 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 SPACA9Q96E40 222 aaPredicted RBP14.57□□□□□ -0.08
SPG11-215ENST00000559193 C2orf50Q96LR7 162 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 CRB3Q9BUF7 120 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 PECRQ9BY49 303 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 SLC5A7Q9GZV3 580 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 METTL8Q9H825 291 aaKnown RBP14.57□□□□□ -0.08
SPG11-215ENST00000559193 MMP26Q9NRE1 261 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 CARHSP1Q9Y2V2 147 aaKnown RBP14.57□□□□□ -0.08
SPG11-215ENST00000559193 PRELID3BQ9Y3B1 194 aa14.57□□□□□ -0.08
SPG11-215ENST00000559193 STMND1H3BQB6 276 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 MBTPS2O43462 519 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 NAT2P11245 290 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 CTSSP25774 331 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 BLVRBP30043 206 aaPredicted RBP14.56□□□□□ -0.08
SPG11-215ENST00000559193 ALDH3B1P43353 468 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 HFEQ30201 348 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 SLC25A43Q8WUT9 341 aaPredicted RBP14.56□□□□□ -0.08
SPG11-215ENST00000559193 TMEM231Q9H6L2 316 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 HDGFL3Q9Y3E1 203 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 CEP192Q8TEP8 1941 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 LOC102725191A0A1B0GVB3 256 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 PMS2P1A4D2B8 440 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 F8W036 122 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 CSTBP04080 98 aaKnown RBP14.56□□□□□ -0.08
SPG11-215ENST00000559193 SERPINA2P20848 420 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 BLOC1S1P78537 153 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 UBE2V2Q15819 145 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 PRAMEF20Q5VT98 475 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 CBLN2Q8IUK8 224 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 DNASE2BQ8WZ79 361 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 ZNF775Q96BV0 537 aaPredicted RBP14.56□□□□□ -0.08
SPG11-215ENST00000559193 TLNRD1Q9H1K6 362 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 LPAR3Q9UBY5 353 aa14.56□□□□□ -0.08
SPG11-215ENST00000559193 ZNF705EA8MWA4 302 aaPredicted RBP14.55□□□□□ -0.08
SPG11-215ENST00000559193 NUDT19A8MXV4 375 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 FAHP16930 419 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 THBS4P35443 961 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 EIF3IQ13347 325 aaKnown RBP14.55□□□□□ -0.08
SPG11-215ENST00000559193 PHYHD1Q5SRE7 291 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 ADAMTS17Q8TE56 1095 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 ZNF160Q9HCG1 818 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 OR2S2Q9NQN1 319 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 GHRLQ9UBU3 117 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 NDRG3Q9UGV2 375 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 MED12Q93074 2177 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 SDK1Q7Z5N4 2213 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 IGKV1D-8A0A087WSZ0 117 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 F12P00748 615 aaPredicted RBP14.55□□□□□ -0.08
SPG11-215ENST00000559193 HOXB5P09067 269 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 PTGER4P35408 488 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 LSM6P62312 80 aaKnown RBP14.55□□□□□ -0.08
SPG11-215ENST00000559193 ENDOGQ14249 297 aaKnown RBP14.55□□□□□ -0.08
SPG11-215ENST00000559193 NSUN5P2Q63ZY6 315 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 HAGHLQ6PII5 290 aaPredicted RBP14.55□□□□□ -0.08
SPG11-215ENST00000559193 CNTNAP3BQ96NU0 1288 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 PHF7Q9BWX1 381 aaPredicted RBP14.55□□□□□ -0.08
SPG11-215ENST00000559193 V9GYS6 101 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 CABIN1Q9Y6J0 2220 aa14.55□□□□□ -0.08
SPG11-215ENST00000559193 OR5H15A6NDH6 313 aa14.54□□□□□ -0.08
SPG11-215ENST00000559193 F5H5K5 113 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms