RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 CSNK2A3Q8NEV1 391 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 EGLN1Q9GZT9 426 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 SLC22A4Q9H015 551 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 ZNF275Q9NSD4 429 aaPredicted RBP13.08□□□□□ -0.32
LINC01220-201ENST00000558575 LPAR3Q9UBY5 353 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 V9GYS6 101 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 ANKRD30BLA7E2S9 258 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 ZNF850A8MQ14 1090 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 GMDSO60547 372 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 DHRS3O75911 302 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 PTBP3O95758 552 aaKnown RBP13.07□□□□□ -0.32
LINC01220-201ENST00000558575 CDK1P06493 297 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 HTR1AP08908 422 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 CSF3P09919 207 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 CCDC159P0C7I6 412 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 ATP6V1B1P15313 513 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 TNFSF4P23510 183 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 CRHBPP24387 322 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 CD200P41217 278 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 NR4A2P43354 598 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 TMEM33P57088 247 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 OR8G1Q15617 311 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 MPPED2Q15777 294 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 DMRTC1Q5HYR2 192 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 IL17RELQ6ZVW7 336 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 WDR86Q86TI4 376 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 SEMA6DQ8NFY4 1073 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 OR10AC1Q8NH08 325 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 RPS4Y2Q8TD47 263 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 GATAD2BQ8WXI9 593 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 CCL17Q92583 94 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 ITFG2Q969R8 447 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 ITPKCQ96DU7 683 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 MRPL48Q96GC5 212 aaKnown RBP13.07□□□□□ -0.32
LINC01220-201ENST00000558575 BPESC1Q9GZL8 116 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 SHARPINQ9H0F6 387 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 CHODLQ9H9P2 273 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 GCM1Q9NP62 436 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 BABAM2Q9NXR7 383 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 ERVK-18Q9QC07 812 aa13.07□□□□□ -0.32
LINC01220-201ENST00000558575 A6NIN4 97 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 NDUFS8O00217 210 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 WNT9BO14905 357 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 ISG15P05161 165 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 FAHP16930 419 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 MYL12AP19105 171 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 GATA4P43694 442 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 TGM4P49221 684 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 RIPPLY1Q0D2K3 151 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 PRDX4Q13162 271 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 IRF3Q14653 427 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 PRAMEF6Q5VXH4 476 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 RNLSQ5VYX0 342 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 TMEM42Q69YG0 159 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 DOK3Q7L591 496 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 COMMD2Q86X83 199 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 KLBQ86Z14 1044 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 C11orf53Q8IXP5 236 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 STX19Q8N4C7 294 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 KLHL36Q8N4N3 616 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 NANOGP1Q8N7R0 232 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 OR52N1Q8NH53 320 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 ZNF420Q8TAQ5 688 aaPredicted RBP13.06□□□□□ -0.32
LINC01220-201ENST00000558575 HPSE2Q8WWQ2 592 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 OR5P3Q8WZ94 311 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 PIGCQ92535 297 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 ADAT1Q9BUB4 502 aaKnown RBP13.06□□□□□ -0.32
LINC01220-201ENST00000558575 PAPOLGQ9BWT3 736 aaKnown RBP13.06□□□□□ -0.32
LINC01220-201ENST00000558575 RASSF4Q9H2L5 321 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 SCN3BQ9NY72 215 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 PIGLQ9Y2B2 252 aa13.06□□□□□ -0.32
LINC01220-201ENST00000558575 IGHV4-61A0A0C4DH41 118 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 ZNF816-ZNF321PA0A0X1KG74 233 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 LOC107986453A0A1B0GWG9 222 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 OGG1O15527 345 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 SYT7O43581 403 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 ZFPL1O95159 310 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 SLC25A16P16260 332 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 EGR1P18146 543 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 SRD5A1P18405 259 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 TNFRSF1AP19438 455 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 SRP9P49458 86 aaKnown RBP13.05□□□□□ -0.32
LINC01220-201ENST00000558575 GBX2P52951 348 aaPredicted RBP13.05□□□□□ -0.32
LINC01220-201ENST00000558575 ZBTB37Q5TC79 503 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 TMEM244Q5VVB8 128 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 TMPRSS11AQ6ZMR5 421 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 MOGAT3Q86VF5 341 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 CELF2-AS1Q8N7Q2 184 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 SPERTQ8NA61 448 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 OR51A4Q8NGJ6 313 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 MYCBPQ99417 103 aaPredicted RBP13.05□□□□□ -0.32
LINC01220-201ENST00000558575 CDCA4Q9BXL8 241 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 TMEM106BQ9NUM4 274 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 PPP1R3CQ9UQK1 317 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 TPRKBQ9Y3C4 175 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 MPC1Q9Y5U8 109 aa13.05□□□□□ -0.32
LINC01220-201ENST00000558575 NOTCH1P46531 2555 aa13.04□□□□□ -0.32
LINC01220-201ENST00000558575 A0A1B0GVI7 797 aa13.04□□□□□ -0.32
LINC01220-201ENST00000558575 MTRF1O75570 445 aaKnown RBP13.04□□□□□ -0.32
LINC01220-201ENST00000558575 UBCP0CG48 685 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms