RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 IGKV1-27A0A075B6S5 117 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 PLATP00750 562 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 HLA-DQB1P01920 261 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 MTCP1P56278 107 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 SCN1BQ07699 218 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 MRPL49Q13405 166 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 OXA1LQ15070 435 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 TRIM16LQ309B1 348 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 PLCXD3Q63HM9 321 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 C22orf34Q6ZV56 151 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 DVL3Q92997 716 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 THAP7Q9BT49 309 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 AUNIPQ9H7T9 357 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 EIF3KQ9UBQ5 218 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 IGHV1-18A0A0C4DH31 117 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 A0A1W2PP11 408 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 CD3GP09693 182 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 PSMB1P20618 241 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 NR4A2P43354 598 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 QRFPP83859 136 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 MOB3CQ70IA8 216 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 TMEM104Q8NE00 496 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 WBP1Q96G27 269 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 C1orf147Q96MC9 270 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 OR2J1Q9GZK6 312 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 ACTR6Q9GZN1 396 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 KCNN3Q9UGI6 736 aa17.57■□□□□ 0.4
SNRPA1-205ENST00000558036 ALX3O95076 343 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 BPNT1O95861 308 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 PTGFRP43088 359 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 ZNF83P51522 516 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 TAS2R20P59543 309 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 PPP1CBP62140 327 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 OR2T2Q6IF00 324 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 TNFAIP8L1Q8WVP5 186 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 CD300LBA8K4G0 201 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 CCKARP32238 428 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 UCP2P55851 309 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 PITPNAQ00169 270 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 MOGAT2Q3SYC2 334 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 SLC22A6Q4U2R8 563 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 TIMM23BQ5SRD1 257 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 MRGPRGQ86SM5 289 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 CDH26Q8IXH8 852 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 OR5L1Q8NGL2 311 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 OR10K1Q8NGX5 313 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 TRIM63Q969Q1 353 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 DMRTA2Q96SC8 542 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 VKORC1Q9BQB6 163 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 PIGMQ9H3S5 423 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 OBP2BQ9NPH6 170 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 OSGIN2Q9Y236 505 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 AMDHD2Q9Y303 409 aa17.56■□□□□ 0.4
SNRPA1-205ENST00000558036 NBASA2RRP1 2371 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 IGLV1-44P01699 117 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 ZNF35P13682 527 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 SPNP16150 400 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 MMP15P51511 669 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 CNN3Q15417 329 aaKnown RBP17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 PNLDC1Q8NA58 520 aaKnown RBP17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 ACBD4Q8NC06 268 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 ST6GALNAC3Q8NDV1 305 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 C19orf18Q8NEA5 215 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 OR1J1Q8NGS3 322 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 RND1Q92730 232 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 SPSB1Q96BD6 273 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 BANF2Q9H503 90 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 NPAP1Q9NZP6 1156 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 MEMO1Q9Y316 297 aa17.55■□□□□ 0.4
SNRPA1-205ENST00000558036 TRAV18A0A075B6X5 111 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 PLA2G10O15496 165 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 XRCC3O43542 346 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 SPRY1O43609 319 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 SFTPCP11686 197 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 SRP9P49458 86 aaKnown RBP17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 DEFA1P59665 94 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 DEFA3P59666 94 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 PRDX4Q13162 271 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 BAIAP2L2Q6UXY1 529 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 Q6ZNX1 250 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 GDPD3Q7L5L3 318 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 YIPF5Q969M3 257 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 PHF21AQ96BD5 680 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 BORCS8Q96FH0 119 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 PCNX1Q96RV3 2341 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 ZMAT3Q9HA38 289 aaKnown RBP17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 ING4Q9UNL4 249 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 MYO7BQ6PIF6 2116 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 MEIOCA2RUB1 952 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 ANGPTL7O43827 346 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 CALCRP30988 508 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 RBP2P50120 134 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 ZNF57Q68EA5 555 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 SLC25A40Q8TBP6 338 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 CMBLQ96DG6 245 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 C11orf54Q9H0W9 315 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 ELL3Q9HB65 397 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 DIABLOQ9NR28 239 aa17.54■□□□□ 0.4
SNRPA1-205ENST00000558036 POLEQ07864 2286 aa17.53■□□□□ 0.4
SNRPA1-205ENST00000558036 TMEM14DPA8MWL7 114 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms