RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 OR5AK2Q8NH90 309 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 RPS4Y2Q8TD47 263 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 ITLN1Q8WWA0 313 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 CCL17Q92583 94 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 GTF3AQ92664 365 aaKnown RBP11.58□□□□□ -0.56
SHMT2-234ENST00000557703 RNF166Q96A37 237 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-234ENST00000557703 ITPKCQ96DU7 683 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 MND1Q9BWT6 205 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 TMEM106BQ9NUM4 274 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 PIGLQ9Y2B2 252 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 RHBDD3Q9Y3P4 386 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 ABCA1O95477 2261 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 DYSFO75923 2080 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 TRBV2A0A0J9YWF9 115 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 PTGES3LE9PB15 166 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 F5H5P2 479 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 OGG1O15527 345 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 LILRA1O75019 489 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 LY6HO94772 140 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 NRASP01111 189 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 HLA-DPB1P04440 258 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 INHBBP09529 407 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 ANOS1P23352 680 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 GNG3P63215 75 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 PRDX4Q13162 271 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 GPR50Q13585 617 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 KCNJ8Q15842 424 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 CARTPTQ16568 116 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 UTS2BQ765I0 119 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 PRSS48Q7RTY5 328 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 BIVMQ86UB2 503 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 MUC20Q8N307 709 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-234ENST00000557703 ZNF676Q8N7Q3 588 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 NANOGP1Q8N7R0 232 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 ZNF485Q8NCK3 441 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 OR5P3Q8WZ94 311 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 PIGCQ92535 297 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 YIPF5Q969M3 257 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 FAM71F1Q96KD3 344 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-234ENST00000557703 CNBD2Q96M20 576 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 BPESC1Q9GZL8 116 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 TLNRD1Q9H1K6 362 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 ISG20L2Q9H9L3 353 aaKnown RBP11.57□□□□□ -0.56
SHMT2-234ENST00000557703 MTORP42345 2549 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 TLN2Q9Y4G6 2542 aa11.57□□□□□ -0.56
SHMT2-234ENST00000557703 A0A096LNT2 108 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 LOC107986453A0A1B0GWG9 222 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 H0YL77 283 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 TMEM178BH3BS89 294 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 P2RY10O00398 339 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 PPIHO43447 177 aaKnown RBP11.56□□□□□ -0.56
SHMT2-234ENST00000557703 RGS10O43665 173 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 NDUFA2O43678 99 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 CD2P06729 351 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 C21orf33P30042 268 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-234ENST00000557703 PSMB10P40306 273 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 KIR3DL2P43630 455 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 NANOS3P60323 173 aaKnown RBP11.56□□□□□ -0.56
SHMT2-234ENST00000557703 GABARAPL2P60520 117 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 CDK5R1Q15078 307 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 TMEM155Q4W5P6 130 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 ZNF573Q86YE8 665 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 DNAAF1Q8NEP3 725 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 OR5D14Q8NGL3 314 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 OR10Z1Q8NGY1 313 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 SMIM19Q96E16 107 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 CHST5Q9GZS9 411 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 ISYNA1Q9NPH2 558 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 RNF7Q9UBF6 113 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 SLC7A11Q9UPY5 501 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 NPTNQ9Y639 398 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 TANC2Q9HCD6 1990 aa11.56□□□□□ -0.56
SHMT2-234ENST00000557703 LOC100289279A0A1B0GTE1 492 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 LRP5LA4QPB2 252 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 ANKRD61A6NGH8 418 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 TRIM64A6NGJ6 449 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 TRIM64BA6NI03 449 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 ZNF850A8MQ14 1090 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 RNF223E7ERA6 249 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 H7C1Q1 480 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 PLPP2O43688 288 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 CDC14BO60729 498 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 ZFPL1O95159 310 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 ACAA1P09110 424 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-234ENST00000557703 MDH2P40926 338 aaKnown RBP11.55□□□□□ -0.56
SHMT2-234ENST00000557703 GZMKP49863 264 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 C11orf91Q3C1V1 193 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 DMKNQ6E0U4 476 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-234ENST00000557703 LRRC28Q86X40 367 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-234ENST00000557703 SERPINA12Q8IW75 414 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 SPICQ8N5J4 248 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 OR1M1Q8NGA1 313 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 ZNF671Q8TAW3 534 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 GPR148Q8TDV2 347 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 PPP1R14AQ96A00 147 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 SPSB1Q96BD6 273 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 RAB39BQ96DA2 213 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 RNF170Q96K19 258 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 ZNF281Q9Y2X9 895 aa11.55□□□□□ -0.56
SHMT2-234ENST00000557703 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.55□□□□□ -0.563e-7■■■■■ 53.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms