RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 LDLRAD3Q86YD5 345 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 FUNDC1Q8IVP5 155 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 CDH26Q8IXH8 852 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 ZSCAN4Q8NAM6 433 aaPredicted RBP4.83□□□□□ -1.64
VPS33B-207ENST00000557470 C19orf18Q8NEA5 215 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 TSPAN14Q8NG11 270 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 MRAPQ8TCY5 172 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 TMEM255BQ8WV15 326 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 SLC7A6Q92536 515 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 ALG12Q9BV10 488 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 TXNIPQ9H3M7 391 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 C16orf95Q9H693 158 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 KCNK9Q9NPC2 374 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 POLE4Q9NR33 117 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 TUBG2Q9NRH3 451 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 ACOXLQ9NUZ1 547 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 STX18Q9P2W9 335 aaKnown RBP4.83□□□□□ -1.64
VPS33B-207ENST00000557470 UBE2J1Q9Y385 318 aaPredicted RBP4.83□□□□□ -1.64
VPS33B-207ENST00000557470 STRAPQ9Y3F4 350 aaKnown RBP4.83□□□□□ -1.64
VPS33B-207ENST00000557470 DOCK11Q5JSL3 2073 aa4.83□□□□□ -1.64
VPS33B-207ENST00000557470 IGHV1-69DA0A0B4J2H0 117 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 LRRC30A6NM36 301 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 C12orf71A8MTZ7 269 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 H7C1C5 153 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 L7N2F9 121 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 P2RY10O00398 339 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 MLNRO43193 412 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 SGCEO43556 437 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 SULT1B1O43704 296 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 IGHV1-69P01742 117 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 COX5BP10606 129 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 GUCA1AP43080 201 aaPredicted RBP4.82□□□□□ -1.64
VPS33B-207ENST00000557470 MRPL19P49406 292 aaKnown RBP4.82□□□□□ -1.64
VPS33B-207ENST00000557470 SRP9P49458 86 aaKnown RBP4.82□□□□□ -1.64
VPS33B-207ENST00000557470 RPL27P61353 136 aaKnown RBP4.82□□□□□ -1.64
VPS33B-207ENST00000557470 LCN6P62502 163 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 MAPRE2Q15555 327 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 ZNF181Q2M3W8 571 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 CEP78Q5JTW2 689 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 DHRS7BQ6IAN0 325 aaPredicted RBP4.82□□□□□ -1.64
VPS33B-207ENST00000557470 OR2T2Q6IF00 324 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 CCDC144NLQ6NUI1 221 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 FBXW12Q6X9E4 464 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 GDPGP1Q6ZNW5 385 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 DCDC5Q6ZRR9 648 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 IGFN1Q86VF2 1251 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 NKAIN4Q8IVV8 208 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 SLC30A8Q8IWU4 369 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 PDZD9Q8IXQ8 264 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 ELMOD2Q8IZ81 293 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 C1orf87Q8N0U7 546 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 SCCPDHQ8NBX0 429 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 C11orf65Q8NCR3 313 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 BHLHE23Q8NDY6 225 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 OR8G5Q8NG78 346 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 OR13G1Q8NGZ3 307 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 LIPHQ8WWY8 451 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 LHX4Q969G2 390 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 TAMM41Q96BW9 452 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 TLCD1Q96CP7 247 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 SGTBQ96EQ0 304 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 NRBF2Q96F24 287 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 MAGEB18Q96M61 343 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 RBM14Q96PK6 669 aaKnown RBP4.82□□□□□ -1.64
VPS33B-207ENST00000557470 TECTBQ96PL2 329 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 RBP7Q96R05 134 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 CPPED1Q9BRF8 314 aaPredicted RBP4.82□□□□□ -1.64
VPS33B-207ENST00000557470 TRIM15Q9C019 465 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 SIRPDQ9H106 197 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 TMBIM4Q9HC24 238 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 CENPMQ9NSP4 180 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 MRPS18AQ9NVS2 196 aaKnown RBP4.82□□□□□ -1.64
VPS33B-207ENST00000557470 PTTG3PQ9NZH4 202 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 CTSZQ9UBR2 303 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 HSPB7Q9UBY9 170 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 COMMD3-BMI1R4GMX3 469 aa4.82□□□□□ -1.64
VPS33B-207ENST00000557470 TET2Q6N021 2002 aaPredicted RBP4.82□□□□□ -1.64
VPS33B-207ENST00000557470 PLXNB1O43157 2135 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 ZNF816-ZNF321PA0A0X1KG74 233 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 OR6C6A6NF89 314 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 EVPLLA8MZ36 301 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 FAM20BO75063 409 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 PTBP3O95758 552 aaKnown RBP4.81□□□□□ -1.64
VPS33B-207ENST00000557470 IGF2P01344 180 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 HLA-DPB1P04440 258 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 DBHP09172 617 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 TNFRSF1BP20333 461 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 MYF6P23409 242 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 RBM34P42696 430 aaKnown RBP4.81□□□□□ -1.64
VPS33B-207ENST00000557470 CRYBA2P53672 197 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 LOXL3P58215 753 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 MTPNP58546 118 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 SCRN3Q0VDG4 424 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 SELPLGQ14242 412 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 CYP51A1Q16850 503 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 ALG10Q5BKT4 473 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 CLEC12AQ5QGZ9 265 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 METTL11BQ5VVY1 283 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 OTPQ5XKR4 325 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms