RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, human

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-223	ENST00000557320	PRAMEF8	Q5VWM4	474 aa		13.31	□□□□□ -0.28
PAPOLA-223	ENST00000557320	PRAMEF7	Q5VXH5	474 aa		13.31	□□□□□ -0.28
PAPOLA-223	ENST00000557320	NECAP1	Q8NC96	275 aa		13.31	□□□□□ -0.28
PAPOLA-223	ENST00000557320	OR13C3	Q8NGS6	347 aa		13.31	□□□□□ -0.28
PAPOLA-223	ENST00000557320	OR9A4	Q8NGU2	314 aa		13.31	□□□□□ -0.28
PAPOLA-223	ENST00000557320	TSLP	Q969D9	159 aa		13.31	□□□□□ -0.28
PAPOLA-223	ENST00000557320	TBX15	Q96SF7	602 aa		13.31	□□□□□ -0.28
PAPOLA-223	ENST00000557320	MACROD1	Q9BQ69	325 aa		13.31	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SH3BGRL3	Q9H299	93 aa		13.31	□□□□□ -0.28
PAPOLA-223	ENST00000557320	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.31	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SLC17A5	Q9NRA2	495 aa		13.31	□□□□□ -0.28
PAPOLA-223	ENST00000557320	GRHPR	Q9UBQ7	328 aa		13.31	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SHISA7	A6NL88	538 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	PRR32	B1ATL7	298 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	NSA2	O95478	260 aa	Known RBP	13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	C1orf105	O95561	183 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	CSNK2A2	P19784	350 aa	Predicted RBP	13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	CDKN1B	P46527	198 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SQSTM1	Q13501	440 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	C1orf194	Q5T5A4	169 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	ADIPOR2	Q86V24	386 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	YAF2	Q8IY57	180 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	ALG12	Q9BV10	488 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	KMT2E	Q8IZD2	1858 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	NDUFS4	O43181	175 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	GALNS	P34059	522 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	MMP16	P51512	607 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	BTN3A2	P78410	334 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SPOCK1	Q08629	439 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	CDKN3	Q16667	212 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	EIPR1	Q53HC9	387 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	C10orf53	Q8N6V4	93 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	OR52N4	Q8NGI2	321 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	OR4K15	Q8NH41	348 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	ERGIC1	Q969X5	290 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	RASD2	Q96D21	266 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SDSL	Q96GA7	329 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320		Q9N2J8	555 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	LSM7	Q9UK45	103 aa	Known RBP	13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	ZFP30	Q9Y2G7	519 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	C5orf42	Q9H799	3197 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320		A0A087WWC5	75 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	CXCR1	P25024	350 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	GAB4	Q2WGN9	574 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	HIKESHI	Q53FT3	197 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	OTP	Q5XKR4	325 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	PLXDC2	Q6UX71	529 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	COX18	Q8N8Q8	333 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	PRRX2	Q99811	253 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SLC26A1	Q9H2B4	701 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	LAMP3	Q9UQV4	416 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	HIF3A	Q9Y2N7	669 aa		13.3	□□□□□ -0.28
PAPOLA-223	ENST00000557320	IGLV3-16	A0A075B6K0	115 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	TRBV11-1	A0A0K0K1C0	115 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	CENPVL1	A0A0U1RR11	272 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	DNAJB6	O75190	326 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	NDUFB2	O95178	105 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	GAPDH	P04406	335 aa	Known RBP	13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	MMP9	P14780	707 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	WNT5A	P41221	380 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	MRPL2	Q5T653	305 aa	Known RBP	13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SLC16A14	Q7RTX9	510 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SLC26A10	Q8NG04	563 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SNIP1	Q8TAD8	396 aa	Known RBP	13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	PAM16	Q9Y3D7	125 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	DOK2	O60496	412 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	RBMX	P38159	391 aa	Known RBP	13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	ASCL1	P50553	236 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	RND3	P61587	244 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	RAB11A	P62491	216 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	HLA-DRB3	P79483	266 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	CST9LP1	Q5W188	147 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	TOMM20L	Q6UXN7	152 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	ZFP62	Q8NB50	900 aa	Predicted RBP	13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	LYPD6B	Q8NI32	183 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SCRT1	Q9BWW7	348 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	MS4A8	Q9BY19	250 aa		13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	STRAP	Q9Y3F4	350 aa	Known RBP	13.29	□□□□□ -0.28
PAPOLA-223	ENST00000557320	TRAPPC6A	O75865	159 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SFT2D2	O95562	160 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	LCAT	P04180	440 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	CCL20	P78556	96 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	RUNX3	Q13761	415 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	MLF2	Q15773	248 aa	Predicted RBP	13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	ANKRD55	Q3KP44	614 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	CHST9	Q7L1S5	443 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SLC35A4	Q96G79	324 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	FBRS	Q9HAH7	460 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	MRM2	Q9UI43	246 aa	Known RBP	13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	PPIAL4A	Q9Y536	164 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	WNT6	Q9Y6F9	365 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	ZNF860	A6NHJ4	632 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	IFNL4	K9M1U5	179 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	HLA-DQA2	P01906	255 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	SEC11B	P0C7V7	166 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	CEACAM1	P13688	526 aa		13.28	□□□□□ -0.28
PAPOLA-223	ENST00000557320	ITPRIPL2	Q3MIP1	535 aa		13.28	□□□□□ -0.28

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