RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 IGHV1-45A0A0A0MS14 117 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 BPNT1O95861 308 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 AANATQ16613 207 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 ZNF585AQ6P3V2 769 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 OR10D3Q8NH80 312 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 C17orf50Q8WW18 174 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 CLDN23Q96B33 292 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 FAAP24Q9BTP7 215 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 EMC3Q9P0I2 261 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 CSAG2Q9Y5P2 127 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 EDN3P14138 238 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 LIFP15018 202 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 AGTR1P30556 359 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 MICBQ29980 383 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 C6orf15Q6UXA7 325 aaPredicted RBP13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 TMEM200AQ86VY9 491 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 NAXDQ8IW45 347 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 SPICQ8N5J4 248 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 SEMA6DQ8NFY4 1073 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 RNASE11Q8TAA1 199 aaKnown RBP13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 CMSS1Q9BQ75 279 aaKnown RBP13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 TREM1Q9NP99 234 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 SLC7A11Q9UPY5 501 aa13.5□□□□□ -0.25
TMEM55B-207ENST00000557041 IGLV3-12A0A075B6K2 115 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 CAMK2BQ13554 666 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 SNAI3Q3KNW1 292 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 ZNF100Q8IYN0 542 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 OIT3Q8WWZ8 545 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 REEP6Q96HR9 211 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 TCFL5Q9UL49 500 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 EML5Q05BV3 1969 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 A0A0A6YYH2 397 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 A6NJ64 397 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 COX6A1P12074 109 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 CPN1P15169 458 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 HIST1H1DP16402 221 aaKnown RBP13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 OR13C8Q8NGS7 320 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 SLC25A28Q96A46 364 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 SRXN1Q9BYN0 137 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 SHANK1Q9Y566 2161 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 MED13Q9UHV7 2174 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 GJE1A6NN92 205 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 NXPH3O95157 252 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 FGL1Q08830 312 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 ZNF260Q3ZCT1 412 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 FDX2Q6P4F2 183 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 GTPBP8Q8N3Z3 284 aaPredicted RBP13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 LPAR5Q9H1C0 372 aa13.49□□□□□ -0.25
TMEM55B-207ENST00000557041 HLA-HP01893 362 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 CHRM2P08172 466 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 MPLP40238 635 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 PTGDSP41222 190 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 SMCO1Q147U7 214 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 C1QTNF12Q5T7M4 302 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 LYG2Q86SG7 212 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 PAQR4Q8N4S7 273 aaPredicted RBP13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 TMEM105Q8N8V8 129 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 TERB2Q8NHR7 220 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 ZNF2Q9BSG1 426 aaPredicted RBP13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 DEFB127Q9H1M4 99 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 PLSCR5A0PG75 271 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 C9orf170A2RU37 121 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 BET1O15155 118 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 GABRA1P14867 456 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 CLEC9AQ6UXN8 241 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 SLC36A1Q7Z2H8 476 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 SULF2Q8IWU5 870 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 TMED6Q8WW62 240 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 MRPL13Q9BYD1 178 aaKnown RBP13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 EML6Q6ZMW3 1958 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 A0A1W2PR80 420 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 MEX3AA1L020 520 aaKnown RBP13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 E9PLN8 166 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 SYNGR4O95473 234 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 CEBPGP53567 150 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 MRPL14Q6P1L8 145 aaKnown RBP13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 CT55Q8WUE5 264 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 HEXA-AS1Q9H8Q6 139 aa13.48□□□□□ -0.25
TMEM55B-207ENST00000557041 LY6G6EA0A0G2JKS1 128 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 A0A1B0GTI1 187 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 SULT1C2O00338 296 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 TECTAO75443 2155 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 KLF7O75840 302 aaPredicted RBP13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 CPT2P23786 658 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 TSPO2Q5TGU0 170 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 SLC25A47Q6Q0C1 308 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 MED30Q96HR3 178 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 HIST1H2AAQ96QV6 131 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 TMEM231Q9H6L2 316 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 SLC17A5Q9NRA2 495 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 U3KQA8 63 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 hCG_1807616A0A1W2PRN6 198 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 ZNF705EA8MWA4 302 aaPredicted RBP13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 VAMP5O95183 116 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 RAC1P63000 192 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 RIPPLY1Q0D2K3 151 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 UBE2V2Q15819 145 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 CLLU1Q5K131 121 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 SLC51BQ86UW2 128 aa13.47□□□□□ -0.25
TMEM55B-207ENST00000557041 UBALD1Q8TB05 177 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms