RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 DYDC1Q8WWB3 177 aa3.92□□□□□ -1.78
ATXN3-239ENST00000556315 HDAC2Q92769 488 aaKnown RBP3.92□□□□□ -1.78
ATXN3-239ENST00000556315 RSRC1Q96IZ7 334 aaKnown RBP3.92□□□□□ -1.78
ATXN3-239ENST00000556315 CITED2Q99967 270 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-239ENST00000556315 WFDC6Q9BQY6 131 aa3.92□□□□□ -1.78
ATXN3-239ENST00000556315 ALG12Q9BV10 488 aa3.92□□□□□ -1.78
ATXN3-239ENST00000556315 NPFFR1Q9GZQ6 430 aa3.92□□□□□ -1.78
ATXN3-239ENST00000556315 MMADHCQ9H3L0 296 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-239ENST00000556315 MEAF6Q9HAF1 191 aa3.92□□□□□ -1.78
ATXN3-239ENST00000556315 NRIP3Q9NQ35 241 aa3.92□□□□□ -1.78
ATXN3-239ENST00000556315 INIPQ9NRY2 104 aa3.92□□□□□ -1.78
ATXN3-239ENST00000556315 AIG1Q9NVV5 245 aa3.92□□□□□ -1.78
ATXN3-239ENST00000556315 NKIRAS1Q9NYS0 192 aa3.92□□□□□ -1.78
ATXN3-239ENST00000556315 CTSZQ9UBR2 303 aa3.92□□□□□ -1.78
ATXN3-239ENST00000556315 RPUSD1Q9UJJ7 312 aaKnown RBP3.92□□□□□ -1.78
ATXN3-239ENST00000556315 GTF2A1LQ9UNN4 478 aa3.92□□□□□ -1.78
ATXN3-239ENST00000556315 TENM3Q9P273 2699 aa3.92□□□□□ -1.78
ATXN3-239ENST00000556315 A0A1B0GWJ7 208 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 ELOVL7A1L3X0 281 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 MEIOCA2RUB1 952 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 NPIPB13A6NJU9 1138 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 IQCF6A8MYZ5 107 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 NPIPB4C9JG80 1138 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 ANKRD65E5RJM6 399 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 H3BUX3 64 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 KPNA4O00629 521 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-239ENST00000556315 DVL1O14640 695 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 MLNRO43193 412 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 SGCEO43556 437 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 OR10H3O60404 316 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 SPAG7O75391 227 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 DCTN3O75935 186 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 LYPD3O95274 346 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 ATP6V1G2O95670 118 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 SERPINE1P05121 402 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 ZNF26P17031 533 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-239ENST00000556315 HOXB9P17482 250 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-239ENST00000556315 AQP2P41181 271 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 CD200P41217 278 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 HTR5AP47898 357 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 RGS6P49758 472 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 RPS6KA3P51812 740 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 UBE2E1P51965 193 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 RAD23AP54725 363 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 FMODQ06828 376 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 RPL18Q07020 188 aaKnown RBP3.91□□□□□ -1.78
ATXN3-239ENST00000556315 ACSM1Q08AH1 577 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 BNIP1Q12981 228 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 ENDOGQ14249 297 aaKnown RBP3.91□□□□□ -1.78
ATXN3-239ENST00000556315 OR8B8Q15620 311 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 NPTX1Q15818 432 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 AANATQ16613 207 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 GTDC1Q4AE62 458 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 ENTPD8Q5MY95 495 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 CLEC12AQ5QGZ9 265 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 C6orf10Q5SRN2 563 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 GCNT6Q5T4J0 391 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 SLC18B1Q6NT16 456 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 C1orf94Q6P1W5 598 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 ARMC8Q8IUR7 673 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 C10orf111Q8N326 155 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 LY6G5BQ8NDX9 201 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 C19orf18Q8NEA5 215 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 OR1F12Q8NHA8 337 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 NFKBIDQ8NI38 313 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 SLC7A13Q8TCU3 470 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 LIPHQ8WWY8 451 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 DDB2Q92466 427 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 VPS33AQ96AX1 596 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 SSX3Q99909 188 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 ZNF426Q9BUY5 554 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 SEMA6AQ9H2E6 1030 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 TXNIPQ9H3M7 391 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 SAR1AQ9NR31 198 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 POLE4Q9NR33 117 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 PTTG3PQ9NZH4 202 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 ONECUT1Q9UBC0 465 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 KAAG1Q9UBP8 84 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 ZMAT5Q9UDW3 170 aaKnown RBP3.91□□□□□ -1.78
ATXN3-239ENST00000556315 PCDHGB5Q9Y5G0 923 aa3.91□□□□□ -1.78
ATXN3-239ENST00000556315 DNAH9Q9NYC9 4486 aa3.9□□□□□ -1.78
ATXN3-239ENST00000556315 DOCK11Q5JSL3 2073 aa3.9□□□□□ -1.78
ATXN3-239ENST00000556315 EPPK1P58107 5090 aaKnown RBP3.9□□□□□ -1.78
ATXN3-239ENST00000556315 A0A1W2PRD5 423 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 A0A1W2PRF3 423 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 A0A1W2PRM7 423 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 TMEM120BA0PK00 339 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 WDR91A4D1P6 747 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 TRAPPC13A5PLN9 417 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 OOEPA6NGQ2 149 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 A6NIZ1 184 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 CPSF4LA6NMK7 179 aaKnown RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 NPIPB5A8MRT5 1133 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 VGLL3A8MV65 326 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 SDHDO14521 159 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 BIRC5O15392 142 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 DOK2O60496 412 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 OR7A10O76100 309 aa3.9□□□□□ -1.79
ATXN3-239ENST00000556315 PTBP3O95758 552 aaKnown RBP3.9□□□□□ -1.79
ATXN3-239ENST00000556315 IGF2P01344 180 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms