RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 HDHD2Q9H0R4 259 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 CSNK1G1Q9HCP0 422 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 AK9Q5TCS8 1911 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 IGLV4-60A0A075B6I1 120 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 C5orf63A6NC05 138 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 TNFRSF11BO00300 401 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 EIF1BO60739 113 aaKnown RBP3.27□□□□□ -1.89
VRK1-205ENST00000555402 CRTAPO75718 401 aaPredicted RBP3.27□□□□□ -1.89
VRK1-205ENST00000555402 PTHP01270 115 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 CISD3P0C7P0 127 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 C1GALT1C1LP0DN25 315 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 NQO2P16083 231 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 NPY1RP25929 384 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 IL12BP29460 328 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 ARL2P36404 184 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 EIF1P41567 113 aaKnown RBP3.27□□□□□ -1.89
VRK1-205ENST00000555402 CRATP43155 626 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 BLVRAP53004 296 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 ATP5J2P56134 94 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 TAS2R31P59538 309 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 MYL6P60660 151 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 UBE2IP63279 158 aaKnown RBP3.27□□□□□ -1.89
VRK1-205ENST00000555402 C16orf72Q14CZ0 275 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 TMPRSS11AQ6ZMR5 421 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 UBALD2Q8IYN6 164 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 OR6K6Q8NGW6 343 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 RXFP4Q8TDU9 374 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 TFGQ92734 400 aaPredicted RBP3.27□□□□□ -1.89
VRK1-205ENST00000555402 FAM131CQ96AQ9 280 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 CCDC124Q96CT7 223 aaKnown RBP3.27□□□□□ -1.89
VRK1-205ENST00000555402 NEURL3Q96EH8 262 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 GLT1D1Q96MS3 346 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 TEAD3Q99594 435 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 RSG1Q9BU20 258 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 UPF3BQ9BZI7 483 aaKnown RBP3.27□□□□□ -1.89
VRK1-205ENST00000555402 TOLLIPQ9H0E2 274 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 KIR3DX1Q9H7L2 352 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 ENPP5Q9UJA9 477 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 ZNF229Q9UJW7 825 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 CES1P1Q9UKY3 287 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 SLC22A14Q9Y267 594 aa3.27□□□□□ -1.89
VRK1-205ENST00000555402 IGKV2-28A0A075B6P5 120 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 BET1O15155 118 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 CALUO43852 315 aaPredicted RBP3.26□□□□□ -1.89
VRK1-205ENST00000555402 KLHL2O95198 593 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 PTTG1O95997 202 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 IGKV2D-28P01615 120 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 OPRK1P41145 380 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 KCNJ3P48549 501 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 SKP1P63208 163 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 IFITM3Q01628 133 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 KDSRQ06136 332 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 PPIDQ08752 370 aaKnown RBP3.26□□□□□ -1.89
VRK1-205ENST00000555402 PNOCQ13519 176 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 VAMP3Q15836 100 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 ZNF470Q6ECI4 717 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 ZFP1Q6P2D0 407 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 OPN5Q6U736 354 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 ASCL4Q6XD76 172 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 CYP4Z1Q86W10 505 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 NELFCDQ8IXH7 590 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 DNAAF3Q8N9W5 541 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 OR4D6Q8NGJ1 314 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 OR8D1Q8WZ84 308 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 GHSRQ92847 366 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 CDS1Q92903 461 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 L3HYPDHQ96EM0 354 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 NAPGQ99747 312 aaPredicted RBP3.26□□□□□ -1.89
VRK1-205ENST00000555402 TBL1YQ9BQ87 522 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 CCDC94Q9BW85 323 aaPredicted RBP3.26□□□□□ -1.89
VRK1-205ENST00000555402 SAMD10Q9BYL1 202 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 GOLPH3Q9H4A6 298 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 ENOPH1Q9UHY7 261 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 POFUT2Q9Y2G5 429 aa3.26□□□□□ -1.89
VRK1-205ENST00000555402 H0YJW9 148 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 DFFAO00273 331 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 SOCS1O15524 211 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 CTNSO60931 367 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 SERPINB7O75635 380 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 GLSO94925 669 aaPredicted RBP3.25□□□□□ -1.89
VRK1-205ENST00000555402 PLEKHA8P1O95397 391 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 GCGP01275 180 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 IVDP26440 423 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 POLR2IP36954 125 aaKnown RBP3.25□□□□□ -1.89
VRK1-205ENST00000555402 TAS2R39P59534 338 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 MRPS15P82914 257 aaKnown RBP3.25□□□□□ -1.89
VRK1-205ENST00000555402 NAB1Q13506 487 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 PIGHQ14442 188 aaPredicted RBP3.25□□□□□ -1.89
VRK1-205ENST00000555402 PTRHD1Q6GMV3 140 aaKnown RBP3.25□□□□□ -1.89
VRK1-205ENST00000555402 THOC7Q6I9Y2 204 aaKnown RBP3.25□□□□□ -1.89
VRK1-205ENST00000555402 CD300LGQ6UXG3 332 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 ZNF565Q8N9K5 539 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 ING5Q8WYH8 240 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 RNF170Q96K19 258 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 RNF157Q96PX1 679 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 CDX2Q99626 313 aaPredicted RBP3.25□□□□□ -1.89
VRK1-205ENST00000555402 CHID1Q9BWS9 393 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 OSBPL11Q9BXB4 747 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
VRK1-205ENST00000555402 C1orf198Q9H425 327 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms