RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 NUDT16L1Q9BRJ7 211 aaKnown RBP15.19■□□□□ 0.02
SHOX-204ENST00000554971 GINS4Q9BRT9 223 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 C1orf198Q9H425 327 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 PIPOXQ9P0Z9 390 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 CYB5R1Q9UHQ9 305 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 AUP1Q9Y679 476 aa15.19■□□□□ 0.02
SHOX-204ENST00000554971 METTL21EPA6NDL7 271 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 AQP7P3A6NL99 342 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 ZNF716A6NP11 495 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 G3V3Q6 166 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 CYTIPO60759 359 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 TSC22D2O75157 780 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 MPZL1O95297 269 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 PTHLHP12272 177 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 LAP3P28838 519 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 GSK3AP49840 483 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 ZNF81P51508 661 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 PLA2G7Q13093 441 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 STEAP1BQ6NZ63 245 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 UEVLDQ8IX04 471 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 ELMOD2Q8IZ81 293 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 PLPP7Q8NBV4 271 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 SEC22CQ9BRL7 303 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 UQCC2Q9BRT2 126 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 FBLN5Q9UBX5 448 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 RAB22AQ9UL26 194 aa15.18■□□□□ 0.02
SHOX-204ENST00000554971 PKDREJQ9NTG1 2253 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 EIF1BO60739 113 aaKnown RBP15.17■□□□□ 0.02
SHOX-204ENST00000554971 TNFSF13O75888 250 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 SYNGR4O95473 234 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 NR2C1P13056 603 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 NTF4P34130 210 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 RIPPLY2Q5TAB7 128 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 KDM8Q8N371 416 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 PPP1R14AQ96A00 147 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 SEH1LQ96EE3 360 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 PRRG4Q9BZD6 226 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 B3GAT1Q9P2W7 334 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 HCFC1P51610 2035 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 PLSCR5A0PG75 271 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 WIPF3A6NGB9 483 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 IL2RAP01589 272 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 IGHG1P01857 330 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 ERCC1P07992 297 aaPredicted RBP15.17■□□□□ 0.02
SHOX-204ENST00000554971 FCGR2AP12318 317 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 ANXA7P20073 488 aaKnown RBP15.17■□□□□ 0.02
SHOX-204ENST00000554971 KIR2DL2P43627 348 aaPredicted RBP15.17■□□□□ 0.02
SHOX-204ENST00000554971 BIDP55957 195 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 KCNMB1Q16558 191 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 CLLU1Q5K131 121 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 TMEM211Q6ICI0 200 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 P4HA3Q7Z4N8 544 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 GABRG1Q8N1C3 465 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 FTMTQ8N4E7 242 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 C11orf40Q8WZ69 217 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 RND1Q92730 232 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 FAM206AQ9NX38 181 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 UBQLN2Q9UHD9 624 aa15.17■□□□□ 0.02
SHOX-204ENST00000554971 FLNBO75369 2602 aaKnown RBP15.17■□□□□ 0.02
SHOX-204ENST00000554971 HRNRQ86YZ3 2850 aaPredicted RBP15.16■□□□□ 0.02
SHOX-204ENST00000554971 HMSDA8MTL9 139 aa15.16■□□□□ 0.02
SHOX-204ENST00000554971 BDKRB2P30411 391 aa15.16■□□□□ 0.02
SHOX-204ENST00000554971 TSPAN5P62079 268 aa15.16■□□□□ 0.02
SHOX-204ENST00000554971 FMODQ06828 376 aa15.16■□□□□ 0.02
SHOX-204ENST00000554971 VWA1Q6PCB0 445 aa15.16■□□□□ 0.02
SHOX-204ENST00000554971 TUSC5Q8IXB3 177 aa15.16■□□□□ 0.02
SHOX-204ENST00000554971 OR6X1Q8NH79 312 aa15.16■□□□□ 0.02
SHOX-204ENST00000554971 ZNF775Q96BV0 537 aaPredicted RBP15.16■□□□□ 0.02
SHOX-204ENST00000554971 SLAMF6Q96DU3 332 aa15.16■□□□□ 0.02
SHOX-204ENST00000554971 OXGR1Q96P68 337 aa15.16■□□□□ 0.02
SHOX-204ENST00000554971 BCO1Q9HAY6 547 aa15.16■□□□□ 0.02
SHOX-204ENST00000554971 TMEM138Q9NPI0 162 aa15.16■□□□□ 0.02
SHOX-204ENST00000554971 MAB21L2Q9Y586 359 aa15.16■□□□□ 0.02
SHOX-204ENST00000554971 M0R233 179 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 SS18L1O75177 396 aaPredicted RBP15.15■□□□□ 0.02
SHOX-204ENST00000554971 CD74P04233 296 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 NFYAP23511 347 aaPredicted RBP15.15■□□□□ 0.02
SHOX-204ENST00000554971 MPZP25189 248 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 RAB14P61106 215 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 ZMYND11Q15326 602 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 BIVMQ86UB2 503 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 OR5D14Q8NGL3 314 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 ITLN2Q8WWU7 325 aaPredicted RBP15.15■□□□□ 0.02
SHOX-204ENST00000554971 GMPPAQ96IJ6 420 aaPredicted RBP15.15■□□□□ 0.02
SHOX-204ENST00000554971 MED29Q9NX70 200 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 LRBAP50851 2863 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 IGKV3D-15A0A087WSY6 115 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 OR6C65A6NJZ3 312 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 KDM4BO94953 1096 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 BPNT1O95861 308 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 ACSM4P0C7M7 580 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 VSIG10L2P0DP72 767 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 AGTR1P30556 359 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 CLRN1P58418 232 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 MEF2DQ14814 521 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 RNPS1Q15287 305 aaKnown RBP15.15■□□□□ 0.02
SHOX-204ENST00000554971 GRK1Q15835 563 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 FAM189A2Q15884 450 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 OR2A2Q6IF42 318 aa15.15■□□□□ 0.02
SHOX-204ENST00000554971 FAAP20Q6NZ36 180 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms