RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 NAA11Q9BSU3 229 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-212ENST00000554467 WDR13Q9H1Z4 485 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 FXYD6-FXYD2A0A087WZ82 144 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 HSPB2A8KAH6 182 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 ZNF878C9JN71 531 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 IGHV2-70P01814 119 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 CBR1P16152 277 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 ZNF17P17021 662 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 PTGFRP43088 359 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 CX3CR1P49238 355 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 TAS2R20P59543 309 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 EIF3IQ13347 325 aaKnown RBP10.27□□□□□ -0.76
SHMT2-212ENST00000554467 HSPB2Q16082 182 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 C9orf135Q5VTT2 229 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 METTL11BQ5VVY1 283 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 DTX1Q86Y01 620 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 TMEM123Q8N131 208 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 OR1J2Q8NGS2 313 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 PNPLA2Q96AD5 504 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 FXYD6Q9H0Q3 95 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 CRLF2Q9HC73 371 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 PNRC2Q9NPJ4 139 aaKnown RBP10.27□□□□□ -0.76
SHMT2-212ENST00000554467 TAS2R3Q9NYW6 316 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 OPN4Q9UHM6 478 aa10.27□□□□□ -0.76
SHMT2-212ENST00000554467 HMSDA8MTL9 139 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 LIPCP11150 499 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 CPN1P15169 458 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 CSRP1P21291 193 aaKnown RBP10.27□□□□□ -0.77
SHMT2-212ENST00000554467 CNR1P21554 472 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 PTAFRP25105 342 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 GUCA1AP43080 201 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-212ENST00000554467 RAP2BP61225 183 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 SNRPEP62304 92 aaKnown RBP10.27□□□□□ -0.77
SHMT2-212ENST00000554467 DYRK1AQ13627 763 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 C12orf45Q8N5I9 185 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-212ENST00000554467 CLEC1AQ8NC01 280 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 OR8B12Q8NGG6 310 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 CYYR1Q96J86 154 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 GPR84Q9NQS5 396 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 CSAG2Q9Y5P2 127 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 ANKRD11Q6UB99 2663 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-212ENST00000554467 TRAV18A0A075B6X5 111 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 TMEM272A0A1B0GTI8 110 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 CALCBP10092 127 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 MMP16P51512 607 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 RAC3P60763 192 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF626Q68DY1 528 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 HAGHLQ6PII5 290 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-212ENST00000554467 TMED4Q7Z7H5 227 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 OR52N4Q8NGI2 321 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 OR4D6Q8NGJ1 314 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 RXFP4Q8TDU9 374 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 NPRL2Q8WTW4 380 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 HAVCR1Q96D42 359 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 NARS2Q96I59 477 aaKnown RBP10.27□□□□□ -0.77
SHMT2-212ENST00000554467 ATG5Q9H1Y0 275 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 NIT2Q9NQR4 276 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF275Q9NSD4 429 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-212ENST00000554467 EMC3Q9P0I2 261 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 FLVCR1Q9Y5Y0 555 aa10.27□□□□□ -0.77
SHMT2-212ENST00000554467 NKX2-8O15522 239 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 DHHO43323 396 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 B4GALT1P15291 398 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 PVALBP20472 110 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-212ENST00000554467 FKBP2P26885 142 aaKnown RBP10.26□□□□□ -0.77
SHMT2-212ENST00000554467 OR2V1Q8NHB1 315 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 TNFAIP8L1Q8WVP5 186 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF251Q9BRH9 671 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 GSTZ1O43708 216 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-212ENST00000554467 GTF2F2P13984 249 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 MSR1P21757 451 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 HTR2CP28335 458 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 CASRP41180 1078 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 AP3S2P59780 193 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 PLGLB1Q02325 96 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 ENDOGQ14249 297 aaKnown RBP10.26□□□□□ -0.77
SHMT2-212ENST00000554467 TMEM244Q5VVB8 128 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF627Q7L945 461 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 FBXO17Q96EF6 278 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 MIOXQ9UGB7 285 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 PCDHGA1Q9Y5H4 931 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 LOC102725191A0A1B0GVB3 256 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 GJE1A6NN92 205 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 SLC17A2O00624 439 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 CTAG2O75638 210 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 S100A6P06703 90 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 UBCP0CG48 685 aaKnown RBP10.26□□□□□ -0.77
SHMT2-212ENST00000554467 VSIG10L2P0DP72 767 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 IGFBP3P17936 291 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-212ENST00000554467 SRSF3P84103 164 aaKnown RBP10.26□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF239Q16600 458 aaKnown RBP10.26□□□□□ -0.77
SHMT2-212ENST00000554467 C4orf46Q504U0 113 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 DHRS7BQ6IAN0 325 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-212ENST00000554467 DEGS2Q6QHC5 323 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 PIP4P1Q86T03 277 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 RTN4RL2Q86UN3 420 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 NABP1Q96AH0 204 aa10.26□□□□□ -0.77
SHMT2-212ENST00000554467 BOKQ9UMX3 212 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-212ENST00000554467 A0A1B0GTI1 187 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 GABARAPH6UMI1 98 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms