RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 AMTP48728 403 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 PCBD1P61457 104 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 SNRPD2P62316 118 aaKnown RBP4□□□□□ -1.77
ATXN3-220ENST00000553491 PSG4Q00888 419 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 GINS1Q14691 196 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 MEP1BQ16820 701 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 PNLIPRP3Q17RR3 467 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 IQCCQ4KMZ1 466 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 KLHL12Q53G59 568 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 MESTQ5EB52 335 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 PAPPA-AS1Q5QFB9 102 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 SPATA46Q5T0L3 261 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 TMEM236Q5W0B7 351 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF774Q6NX45 483 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 DNM1P34Q6PK57 102 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 CORO6Q6QEF8 472 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 Q71RC1 249 aaPredicted RBP4□□□□□ -1.77
ATXN3-220ENST00000553491 MYPOPQ86VE0 399 aaPredicted RBP4□□□□□ -1.77
ATXN3-220ENST00000553491 HS3ST5Q8IZT8 346 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 ZCCHC24Q8N2G6 241 aaKnown RBP4□□□□□ -1.77
ATXN3-220ENST00000553491 SVOPLQ8N434 492 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 IQCF1Q8N6M8 205 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 LRRC75AQ8NAA5 344 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 SDR9C7Q8NEX9 313 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 PROKR2Q8NFJ6 384 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 OR4F15Q8NGB8 312 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 OR9Q1Q8NGQ5 310 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 OR1J1Q8NGS3 322 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 OR6K6Q8NGW6 343 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 FNDC8Q8TC99 324 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 PYDC1Q8WXC3 89 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 C11orf40Q8WZ69 217 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 RAB3IPQ96QF0 476 aaPredicted RBP4□□□□□ -1.77
ATXN3-220ENST00000553491 NIPSNAP1Q9BPW8 284 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 RHNO1Q9BSD3 238 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF416Q9BWM5 594 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 CACNG6Q9BXT2 260 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 MRPL13Q9BYD1 178 aaKnown RBP4□□□□□ -1.77
ATXN3-220ENST00000553491 OR51V1Q9H2C8 321 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 MMADHCQ9H3L0 296 aaPredicted RBP4□□□□□ -1.77
ATXN3-220ENST00000553491 MED20Q9H944 212 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 NOX3Q9HBY0 568 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 DYNLRB1Q9NP97 96 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 CENPMQ9NSP4 180 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 CBLN4Q9NTU7 201 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 ARMC1Q9NVT9 282 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 B3GNT2Q9NY97 397 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 MRPL15Q9P015 296 aaKnown RBP4□□□□□ -1.77
ATXN3-220ENST00000553491 OR14J1Q9UGF5 321 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 B9D1Q9UPM9 204 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 TEX15Q9BXT5 2789 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 WNK2Q9Y3S1 2297 aa4□□□□□ -1.77
ATXN3-220ENST00000553491 ITPR3Q14573 2671 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 UNC79Q9P2D8 2635 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 CCDC168Q8NDH2 2452 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 MALRD1Q5VYJ5 2156 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 TCRBV3S1A0A5B6 114 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 FAM90A10PA6NDY2 464 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 FAM183AA6NL82 134 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 CENPBD1B2RD01 187 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 ANKRD65E5RJM6 399 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 PRR23D1E9PI22 279 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-220ENST00000553491 M0QZ24 198 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 SGCEO43556 437 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 IDH3BO43837 385 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 LY6HO94772 140 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 CD8AP01732 235 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 IGHMP01871 453 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 ERCC1P07992 297 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-220ENST00000553491 CST2P09228 141 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 TSPAN19P0C672 248 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 PRR23D2P0DMB1 279 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-220ENST00000553491 ANXA8P13928 327 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 CTLA4P16410 223 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF14P17017 642 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-220ENST00000553491 PAICSP22234 425 aaKnown RBP3.99□□□□□ -1.77
ATXN3-220ENST00000553491 FMO3P31513 532 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 HTR5AP47898 357 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 GTF2A1P52655 376 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-220ENST00000553491 UCP2P55851 309 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 GLO1Q04760 184 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 COX10Q12887 443 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 SNAPC1Q16533 368 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 HIST3H3Q16695 136 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 CLEC12BQ2HXU8 276 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 PGGHGQ32M88 737 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF718Q3SXZ3 478 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 SLC36A3Q495N2 470 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 C10orf128Q5T292 105 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 FAM27BQ5VT28 67 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 RPL13AP3Q6NVV1 102 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 ARL9Q6T311 187 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 B3GLCTQ6Y288 498 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 C9orf47Q6ZRZ4 202 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 RASSF6Q6ZTQ3 369 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 DPPA2Q7Z7J5 298 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 LRP11Q86VZ4 500 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 OR6V1Q8N148 313 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 MAPK1IP1LQ8NDC0 245 aa3.99□□□□□ -1.77
ATXN3-220ENST00000553491 WFDC11Q8NEX6 87 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms