RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 RIPPLY1Q0D2K3 151 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 STK11Q15831 433 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 PNLIPRP3Q17RR3 467 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 OR52W1Q6IF63 320 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 MYO7BQ6PIF6 2116 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 CD163Q86VB7 1156 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 ZFP62Q8NB50 900 aaPredicted RBP12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 TNFAIP8L1Q8WVP5 186 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 PIGTQ969N2 578 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 PRRT1Q99946 306 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 PRRG4Q9BZD6 226 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 ACKR4Q9NPB9 350 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 ZNF391Q9UJN7 358 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 SPAARA0A1B0GVQ0 90 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 ZNF724A8MTY0 619 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 RPL36A-HNRNPH2H7BZ11 118 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 CSN2P05814 226 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 TBPP20226 339 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 NUBP1P53384 320 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 SOX8P57073 446 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 CXADRP78310 365 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 ARF1P84077 181 aaKnown RBP12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 SLC10A1Q14973 349 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 NKPD1Q17RQ9 610 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 LGALSLQ3ZCW2 172 aaPredicted RBP12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 SCGB2B2Q4G0G5 96 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 C4orf46Q504U0 113 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 ATPAF1Q5TC12 328 aaPredicted RBP12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 OR2AK2Q8NG84 335 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 OR51T1Q8NGJ9 327 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 LILRB4Q8NHJ6 448 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 FNDC9Q8TBE3 224 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 CALHM2Q9HA72 323 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 BCO1Q9HAY6 547 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 GPR173Q9NS66 373 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 ANAPC10Q9UM13 185 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 PLEKHA6Q9Y2H5 1048 aa12.21□□□□□ -0.45
RAB3IP-216ENST00000552199 OR6C65A6NJZ3 312 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 MFNGO00587 321 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 TOXO94900 526 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 ACTL6AO96019 429 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 OR4E1P0C645 316 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 MGMTP16455 207 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 NAT1P18440 290 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 S100A1P23297 94 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 RRADP55042 308 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 ZMYND11Q15326 602 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 C2orf68Q2NKX9 166 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 PABPC1L2AQ5JQF8 200 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF767PQ75MW2 155 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 ARHGAP5-AS1Q96IT6 56 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 RADILQ96JH8 1075 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 S100A13Q99584 98 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 EIF3KQ9UBQ5 218 aaKnown RBP12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 SLC23A1Q9UHI7 598 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 CACNA1HO95180 2353 aa12.21□□□□□ -0.46
RAB3IP-216ENST00000552199 FOXI3A8MTJ6 420 aaPredicted RBP12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 LRP3O75074 770 aa12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 RAD51DO75771 328 aa12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 TPOP07202 933 aa12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF24P17028 368 aa12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 HRH1P35367 487 aa12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 TMED4Q7Z7H5 227 aa12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 FAM109AQ8N4B1 249 aa12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 STEAP2Q8NFT2 490 aa12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 OR10K1Q8NGX5 313 aa12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 SPSB1Q96BD6 273 aa12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 TM2D1Q9BX74 207 aa12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 RGCCQ9H4X1 137 aa12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.2□□□□□ -0.461e-6■■■■□ 24.6
RAB3IP-216ENST00000552199 LIPGQ9Y5X9 500 aa12.2□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF407Q9C0G0 2248 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF587BE7ETH6 402 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 H3BUI4 141 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 TSC22D2O75157 780 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 SERPINA2P20848 420 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 PRKACBP22694 351 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 MTCP1P56278 107 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 UBE2MP61081 183 aaKnown RBP12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 ARG2P78540 354 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 RNPS1Q15287 305 aaKnown RBP12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 C3AR1Q16581 482 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF766Q5HY98 468 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 TMEM42Q69YG0 159 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF100Q8IYN0 542 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 UXS1Q8NBZ7 420 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 CPEB3Q8NE35 698 aaKnown RBP12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 SNAPC3Q92966 411 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 MRGPRFQ96AM1 343 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 WDR89Q96FK6 387 aaPredicted RBP12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 OCSTAMPQ9BR26 566 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 B3GNT2Q9NY97 397 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 ATPIF1Q9UII2 106 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 VSIG4Q9Y279 399 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 hCG_38984A0A1B0GV85 526 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 GOSR2O14653 212 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 SIX6O95475 246 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 CBX5P45973 191 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 TSPAN5P62079 268 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms