RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CCDC54Q8NEL0 328 aa17.02■□□□□ 0.31
SSH1-209ENST00000551165 TNFAIP8L1Q8WVP5 186 aa17.02■□□□□ 0.31
SSH1-209ENST00000551165 PIGCQ92535 297 aa17.02■□□□□ 0.31
SSH1-209ENST00000551165 AKAP1Q92667 903 aaKnown RBP eCLIP17.02■□□□□ 0.31
SSH1-209ENST00000551165 HPS1Q92902 700 aa17.02■□□□□ 0.31
SSH1-209ENST00000551165 PLSCR4Q9NRQ2 329 aa17.02■□□□□ 0.31
SSH1-209ENST00000551165 ING4Q9UNL4 249 aa17.02■□□□□ 0.31
SSH1-209ENST00000551165 ANKRD20A5PA0PJZ0 165 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 CDC14BO60729 498 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 ALX3O95076 343 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 NRASP01111 189 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 PRSS3P35030 304 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 MRPS10P82664 201 aaKnown RBP17.01■□□□□ 0.31
SSH1-209ENST00000551165 OR2A2Q6IF42 318 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 SLC30A7Q8NEW0 376 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 UBASH3BQ8TF42 649 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 SEH1LQ96EE3 360 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 MARVELD1Q9BSK0 173 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 REPIN1Q9BWE0 567 aaKnown RBP17.01■□□□□ 0.31
SSH1-209ENST00000551165 ZNF629Q9UEG4 869 aaPredicted RBP17.01■□□□□ 0.31
SSH1-209ENST00000551165 TRAV6A0A075B6T7 132 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 H7C417 338 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 CRTAPO75718 401 aaPredicted RBP17.01■□□□□ 0.31
SSH1-209ENST00000551165 AGFG2O95081 481 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 SERPINA5P05154 406 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 ZNF14P17017 642 aaPredicted RBP17.01■□□□□ 0.31
SSH1-209ENST00000551165 APLNRP35414 380 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 MTCP1P56278 107 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 CLVS2Q5SYC1 327 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 AGAP6Q5VW22 663 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 RFPL4BQ6ZWI9 263 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 OR56B2PQ8NGI1 322 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 APOBEC3DQ96AK3 386 aaPredicted RBP17.01■□□□□ 0.31
SSH1-209ENST00000551165 MTFP1Q9UDX5 166 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 ZNF391Q9UJN7 358 aa17.01■□□□□ 0.31
SSH1-209ENST00000551165 SOCS1O15524 211 aa17■□□□□ 0.31
SSH1-209ENST00000551165 ANGPTL7O43827 346 aa17■□□□□ 0.31
SSH1-209ENST00000551165 NAT2P11245 290 aa17■□□□□ 0.31
SSH1-209ENST00000551165 CXADRP78310 365 aa17■□□□□ 0.31
SSH1-209ENST00000551165 DYRK1AQ13627 763 aa17■□□□□ 0.31
SSH1-209ENST00000551165 CHST4Q8NCG5 386 aa17■□□□□ 0.31
SSH1-209ENST00000551165 OR4D10Q8NGI6 311 aa17■□□□□ 0.31
SSH1-209ENST00000551165 CACNG6Q9BXT2 260 aa17■□□□□ 0.31
SSH1-209ENST00000551165 FBLN5Q9UBX5 448 aa17■□□□□ 0.31
SSH1-209ENST00000551165 GPR160Q9UJ42 338 aa17■□□□□ 0.31
SSH1-209ENST00000551165 NCOR2Q9Y618 2525 aa17■□□□□ 0.31
SSH1-209ENST00000551165 METTL21EPA6NDL7 271 aa17■□□□□ 0.31
SSH1-209ENST00000551165 SPRY1O43609 319 aaPredicted RBP17■□□□□ 0.31
SSH1-209ENST00000551165 RBBP9O75884 186 aa17■□□□□ 0.31
SSH1-209ENST00000551165 TPPPO94811 219 aa17■□□□□ 0.31
SSH1-209ENST00000551165 GNB3P16520 340 aa17■□□□□ 0.31
SSH1-209ENST00000551165 COX5AP20674 150 aa17■□□□□ 0.31
SSH1-209ENST00000551165 IDH3GP51553 393 aaPredicted RBP17■□□□□ 0.31
SSH1-209ENST00000551165 TGFBR3Q03167 851 aa17■□□□□ 0.31
SSH1-209ENST00000551165 TATDN3Q17R31 274 aa17■□□□□ 0.31
SSH1-209ENST00000551165 PCGF3Q3KNV8 242 aa17■□□□□ 0.31
SSH1-209ENST00000551165 ZNF260Q3ZCT1 412 aa17■□□□□ 0.31
SSH1-209ENST00000551165 OLFML2AQ68BL7 652 aa17■□□□□ 0.31
SSH1-209ENST00000551165 MOB3CQ70IA8 216 aa17■□□□□ 0.31
SSH1-209ENST00000551165 CXorf67Q86X51 503 aaPredicted RBP17■□□□□ 0.31
SSH1-209ENST00000551165 GPX8Q8TED1 209 aa17■□□□□ 0.31
SSH1-209ENST00000551165 C15orf40Q8WUR7 153 aa17■□□□□ 0.31
SSH1-209ENST00000551165 NANOS1Q8WY41 292 aaKnown RBP17■□□□□ 0.31
SSH1-209ENST00000551165 NUDT15Q9NV35 164 aa17■□□□□ 0.31
SSH1-209ENST00000551165 TLN1Q9Y490 2541 aaKnown RBP16.99■□□□□ 0.31
SSH1-209ENST00000551165 ZNF850A8MQ14 1090 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 CENPXA8MT69 81 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 LILRA1O75019 489 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 TDGF1P3P51864 188 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 ZP1P60852 638 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 UBE2NP61088 152 aaKnown RBP16.99■□□□□ 0.31
SSH1-209ENST00000551165 SPATA46Q5T0L3 261 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 WDR31Q8NA23 367 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 PNLDC1Q8NA58 520 aaKnown RBP16.99■□□□□ 0.31
SSH1-209ENST00000551165 DVL3Q92997 716 aaPredicted RBP16.99■□□□□ 0.31
SSH1-209ENST00000551165 SELENOIQ9C0D9 397 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 CHD8Q9HCK8 2581 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 TCRBP04435 133 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 SERPINA2P20848 420 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 CAPZA1P52907 286 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 TMPRSS3P57727 454 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 CDNFQ49AH0 187 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 C1orf185Q5T7R7 199 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 Q6ZTK2 550 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 BHLHE23Q8NDY6 225 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 KCNG3Q8TAE7 436 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 AQP3Q92482 292 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 FGF23Q9GZV9 251 aaPredicted RBP16.99■□□□□ 0.31
SSH1-209ENST00000551165 ELL3Q9HB65 397 aaPredicted RBP16.99■□□□□ 0.31
SSH1-209ENST00000551165 PROCRQ9UNN8 238 aa16.99■□□□□ 0.31
SSH1-209ENST00000551165 ZNF816-ZNF321PA0A0X1KG74 233 aa16.98■□□□□ 0.31
SSH1-209ENST00000551165 INMT-MINDY4F8WBC2 141 aa16.98■□□□□ 0.31
SSH1-209ENST00000551165 LINC00303Q3SY05 128 aa16.98■□□□□ 0.31
SSH1-209ENST00000551165 KRTCAP3Q53RY4 240 aa16.98■□□□□ 0.31
SSH1-209ENST00000551165 PLAC9Q5JTB6 97 aa16.98■□□□□ 0.31
SSH1-209ENST00000551165 MRPL21Q7Z2W9 205 aaKnown RBP16.98■□□□□ 0.31
SSH1-209ENST00000551165 SPSB1Q96BD6 273 aa16.98■□□□□ 0.31
SSH1-209ENST00000551165 WBP1Q96G27 269 aa16.98■□□□□ 0.31
SSH1-209ENST00000551165 TMEM59Q9BXS4 323 aa16.98■□□□□ 0.31
SSH1-209ENST00000551165 DPAGT1Q9H3H5 408 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms