RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CLDND2Q8NHS1 167 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 RASSF5Q8WWW0 418 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 C11orf40Q8WZ69 217 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 NSMAFQ92636 917 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 CCT8L2Q96SF2 557 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 AMELYQ99218 206 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 SH3GL1Q99961 368 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 OR51B6Q9H340 312 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 OR52D1Q9H346 318 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 EGLN3Q9H6Z9 239 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 EFCAB1Q9HAE3 211 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 SIAEQ9HAT2 523 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 NTN4Q9HB63 628 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 ZNF275Q9NSD4 429 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-214ENST00000550893 GID8Q9NWU2 228 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 TMEM160Q9NX00 188 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 TAS2R1Q9NYW7 299 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 NOTCH1P46531 2555 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 LOC390937A0A1W2PQ73 354 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 EFCAB9A8MZ26 197 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 F5H0A9 414 aaPredicted RBP4.04□□□□□ -1.76
SCAF11-214ENST00000550893 ARPC3O15145 178 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 RER1O15258 196 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 LMX1BO60663 402 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 CCDC22O60826 627 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 CLUP10909 449 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 UMPSP11172 480 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 SLC25A16P16260 332 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 GTF2E2P29084 291 aaKnown RBP4.04□□□□□ -1.76
SCAF11-214ENST00000550893 RRM2P31350 389 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 DAP3P51398 398 aaKnown RBP4.04□□□□□ -1.76
SCAF11-214ENST00000550893 UCP2P55851 309 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 UBE2NP61088 152 aaKnown RBP4.04□□□□□ -1.76
SCAF11-214ENST00000550893 SNRPD2P62316 118 aaKnown RBP4.04□□□□□ -1.76
SCAF11-214ENST00000550893 COX10Q12887 443 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 PSG7Q13046 419 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 KLHL12Q53G59 568 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 WDR73Q6P4I2 378 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 WDR86Q86TI4 376 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 NAA40Q86UY6 237 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 SATL1Q86VE3 508 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 CCDC36Q8IYA8 594 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 RNF113BQ8IZP6 322 aaKnown RBP4.04□□□□□ -1.76
SCAF11-214ENST00000550893 OR52J3Q8NH60 311 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 SLC25A40Q8TBP6 338 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 FANK1Q8TC84 345 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 KLF14Q8TD94 323 aaPredicted RBP4.04□□□□□ -1.76
SCAF11-214ENST00000550893 PYURFQ96I23 114 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 SAMD8Q96LT4 415 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 C1orf147Q96MC9 270 aaPredicted RBP4.04□□□□□ -1.76
SCAF11-214ENST00000550893 CDRT15Q96T59 188 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 NIPSNAP1Q9BPW8 284 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 RBM4Q9BWF3 364 aaKnown RBP4.04□□□□□ -1.76
SCAF11-214ENST00000550893 OR2J1Q9GZK6 312 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 DENND2DQ9H6A0 471 aaPredicted RBP4.04□□□□□ -1.76
SCAF11-214ENST00000550893 PPP1R3EQ9H7J1 279 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 IL1RAPQ9NPH3 570 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 FAIMQ9NVQ4 179 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 ACTR3BQ9P1U1 418 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 ZNF319Q9P2F9 582 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 SLC7A8Q9UHI5 535 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 OPN4Q9UHM6 478 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 SLC13A4Q9UKG4 626 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 POU2F3Q9UKI9 436 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 KCNS2Q9ULS6 477 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 POFUT2Q9Y2G5 429 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 KLHDC2Q9Y2U9 406 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 ARL2BPQ9Y2Y0 163 aa4.04□□□□□ -1.76
SCAF11-214ENST00000550893 A0A1W2PRG6 482 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 TCRBV3S1A0A5B6 114 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 ZNF726A6NNF4 738 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 PRSS47A8MTI9 375 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 A8MV72 311 aaPredicted RBP4.03□□□□□ -1.76
SCAF11-214ENST00000550893 H0YL77 283 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.03□□□□□ -1.76
SCAF11-214ENST00000550893 M0R233 179 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 NDUFS8O00217 210 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 TLX2O43763 284 aaPredicted RBP4.03□□□□□ -1.76
SCAF11-214ENST00000550893 KRT33AO76009 404 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 NDUFB2O95178 105 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 RAB36O95755 333 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 FAM107AO95990 144 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 IGHV2-70P01814 119 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 IGHV2-5P01817 119 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 CD55P08174 381 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 SAGP10523 405 aaPredicted RBP4.03□□□□□ -1.76
SCAF11-214ENST00000550893 KITLGP21583 273 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 MSR1P21757 451 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 USF1P22415 310 aaPredicted RBP4.03□□□□□ -1.76
SCAF11-214ENST00000550893 SLC2A5P22732 501 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 STOMP27105 288 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 POU1F1P28069 291 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 EPHA2P29317 976 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 CAPZA2P47755 286 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 RAD23AP54725 363 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 ELF3P78545 371 aaPredicted RBP4.03□□□□□ -1.76
SCAF11-214ENST00000550893 IL1RL1Q01638 556 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.03□□□□□ -1.76
SCAF11-214ENST00000550893 CD47Q08722 323 aa4.03□□□□□ -1.76
SCAF11-214ENST00000550893 TSPAN31Q12999 210 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms