RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PAPOLGQ9BWT3 736 aaKnown RBP11.04□□□□□ -0.64
RAB5C-206ENST00000550406 SLC22A4Q9H015 551 aa11.04□□□□□ -0.64
RAB5C-206ENST00000550406 COMMD4Q9H0A8 199 aa11.04□□□□□ -0.64
RAB5C-206ENST00000550406 GPR173Q9NS66 373 aa11.04□□□□□ -0.64
RAB5C-206ENST00000550406 TREM2Q9NZC2 230 aa11.04□□□□□ -0.64
RAB5C-206ENST00000550406 IL19Q9UHD0 177 aa11.04□□□□□ -0.64
RAB5C-206ENST00000550406 ENPP5Q9UJA9 477 aa11.04□□□□□ -0.64
RAB5C-206ENST00000550406 SF3B6Q9Y3B4 125 aaKnown RBP11.04□□□□□ -0.64
RAB5C-206ENST00000550406 MPC1Q9Y5U8 109 aa11.04□□□□□ -0.64
RAB5C-206ENST00000550406 YLPM1P49750 1951 aaKnown RBP11.04□□□□□ -0.64
RAB5C-206ENST00000550406 IGKV1-9A0A0C4DH69 117 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 ANKRD61A6NGH8 418 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 SSX4O60224 188 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 RP2O75695 350 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 INMTO95050 263 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 NRASP01111 189 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 HSMCR30P0CW71 290 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 DAOP14920 347 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 CPEP16870 476 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 SOX2P48431 317 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 ART1P52961 327 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 GPR50Q13585 617 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 MPPED2Q15777 294 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 SSX1Q16384 188 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 CEP78Q5JTW2 689 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 PRAMEF6Q5VXH4 476 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 LIPKQ5VXJ0 399 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 UNQ9370/PRO34162Q6UXP9 181 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 ZDHHC23Q8IYP9 409 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 SVOPQ8N4V2 548 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 ZNF525Q8N782 197 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 TSPAN14Q8NG11 270 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 OR13C3Q8NGS6 347 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 ORAI1Q96D31 301 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 NR1H4Q96RI1 486 aaPredicted RBP11.03□□□□□ -0.64
RAB5C-206ENST00000550406 GCM1Q9NP62 436 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 DECR2Q9NUI1 292 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 DCAF16Q9NXF7 216 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 AKAP9Q99996 3911 aa11.03□□□□□ -0.64
RAB5C-206ENST00000550406 CDC14BO60729 498 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 SMIM18P0DKX4 95 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 ZNF12P17014 697 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 GNALP38405 381 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 CRYBB2P43320 205 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 GATA4P43694 442 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 RPS25P62851 125 aaKnown RBP11.02□□□□□ -0.65
RAB5C-206ENST00000550406 INSL4Q14641 139 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 TESK1Q15569 626 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 CEACAM21Q3KPI0 293 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 YIF1BQ5BJH7 314 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 ARMCX4Q5H9R4 360 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 FAM76BQ5HYJ3 339 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 CLVS2Q5SYC1 327 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 CRIP3Q6Q6R5 217 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 KCTD8Q6ZWB6 473 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 RNF144BQ7Z419 303 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 PHC2Q8IXK0 858 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 PARP16Q8N5Y8 322 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 CELF2-AS1Q8N7Q2 184 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 ZNF420Q8TAQ5 688 aaPredicted RBP11.02□□□□□ -0.65
RAB5C-206ENST00000550406 GPR148Q8TDV2 347 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 RDH5Q92781 318 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 C10orf35Q96D05 121 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 CHST5Q9GZS9 411 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 EGLN1Q9GZT9 426 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 SAP30LQ9HAJ7 183 aa11.02□□□□□ -0.65
RAB5C-206ENST00000550406 BARX1Q9HBU1 254 aaPredicted RBP11.02□□□□□ -0.65
RAB5C-206ENST00000550406 CR1P17927 2039 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 A0A087WXM4 84 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 TRBV5-7A0A0A0MS05 114 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 IGHV1-69-2A0A0G2JMI3 117 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 PIN1P1O15428 100 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 TPD52L2O43399 206 aaKnown RBP11.01□□□□□ -0.65
RAB5C-206ENST00000550406 SC5DO75845 299 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 RPSAP08865 295 aaKnown RBP11.01□□□□□ -0.65
RAB5C-206ENST00000550406 TNFSF4P23510 183 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 SRP9P49458 86 aaKnown RBP11.01□□□□□ -0.65
RAB5C-206ENST00000550406 GP2P55259 537 aaKnown RBP11.01□□□□□ -0.65
RAB5C-206ENST00000550406 MRPS11P82912 194 aaKnown RBP11.01□□□□□ -0.65
RAB5C-206ENST00000550406 HOXA4Q00056 320 aaPredicted RBP11.01□□□□□ -0.65
RAB5C-206ENST00000550406 Q5PR19 223 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 PLCXD3Q63HM9 321 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 ZNF529Q6P280 563 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 PRSS57Q6UWY2 283 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 TMEM91Q6ZNR0 172 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 UTS2BQ765I0 119 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 MOGAT3Q86VF5 341 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 SPERTQ8NA61 448 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 OR1M1Q8NGA1 313 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 OR5A2Q8NGI9 324 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 OR8S1Q8NH09 359 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 TSEN15Q8WW01 171 aaKnown RBP11.01□□□□□ -0.65
RAB5C-206ENST00000550406 UFD1Q92890 307 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 RNF170Q96K19 258 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 MICU1Q9BPX6 476 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 TLNRD1Q9H1K6 362 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 PPIL3Q9H2H8 161 aaKnown RBP11.01□□□□□ -0.65
RAB5C-206ENST00000550406 ABCB9Q9NP78 766 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 UFSP2Q9NUQ7 469 aa11.01□□□□□ -0.65
RAB5C-206ENST00000550406 ITGB1BP2Q9UKP3 347 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms