RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 BARX1Q9HBU1 254 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-212ENST00000549162 RAB22AQ9UL26 194 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 DNAH6Q9C0G6 4158 aa4.17□□□□□ -1.74
SCAF11-212ENST00000549162 A0A0G2JMM0 328 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 A0A1W2PPB8 328 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 A0A1W2PRS3 328 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 GAGE10A6NGK3 116 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 KIR3DP1A8MWS1 328 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 A8MZ25 164 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 MKRN2OSH3BPM6 223 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 GABARAPH6UMI1 98 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 ZG16O60844 167 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 RP2O75695 350 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 SLC22A5O76082 557 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 CD8AP01732 235 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 EPHA2P29317 976 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 BTCP35070 178 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 BSXQ3C1V8 233 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 PYHIN1Q6K0P9 492 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 LPCAT3Q6P1A2 487 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 GPR141Q7Z602 305 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 SYT14Q8NB59 555 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF114Q8NC26 417 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 FDCSPQ8NFU4 85 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 OR5AK3PQ8NH89 298 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 C11orf40Q8WZ69 217 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 TXNDC15Q96J42 360 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 Q96M85 177 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 NRIP2Q9BQI9 281 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 ABHD6Q9BV23 337 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 HCAR1Q9BXC0 346 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 EGLN3Q9H6Z9 239 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 PLGRKTQ9HBL7 147 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 PNMA8CA0A1B0GUJ8 204 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 A0A1W2PPW3 197 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 SMIM30A4D0T7 59 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 FAM229AH3BQW9 127 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 SPRY1O43609 319 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-212ENST00000549162 SLC25A17O43808 307 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 CTLA4P16410 223 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 IGHV1-2P23083 117 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 SHC1P29353 583 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 RCVRNP35243 200 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 MFAP4P55083 255 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 C1DQ13901 141 aaKnown RBP4.16□□□□□ -1.74
SCAF11-212ENST00000549162 OTUD3Q5T2D3 398 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-212ENST00000549162 CENPVQ7Z7K6 275 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-212ENST00000549162 NAA40Q86UY6 237 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 SHISA5Q8N114 240 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 SLC25A38Q96DW6 304 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 FBXO17Q96EF6 278 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 AJUBAQ96IF1 538 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF416Q9BWM5 594 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 ACTR6Q9GZN1 396 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 ARV1Q9H2C2 271 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 ERVK-18Q9QC07 812 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 ERGIC3Q9Y282 383 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 G3V3Y1 287 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 GABRPO00591 440 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 ABCD4O14678 606 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 MITFO75030 526 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-212ENST00000549162 SERPINI2O75830 405 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 OR2A4O95047 310 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 CHRNB4P30926 498 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 FMO3P31513 532 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 PTH2RP49190 550 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 UCP2P55851 309 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 CARD18P57730 90 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 RPS27AP62979 156 aaKnown RBP4.16□□□□□ -1.74
SCAF11-212ENST00000549162 FAM3AP98173 230 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 HOGA1Q86XE5 327 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 TCTE3Q8IZS6 198 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 PAQR4Q8N4S7 273 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF439Q8NDP4 499 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 SUN5Q8TC36 379 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 EDARADDQ8WWZ3 215 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 OR2A7Q96R45 310 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 VCX3AQ9NNX9 186 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 IL17BQ9UHF5 180 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 KLHDC2Q9Y2U9 406 aa4.16□□□□□ -1.74
SCAF11-212ENST00000549162 DPPA5A6NC42 116 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 IFITM5A6NNB3 132 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 FAM25EA8MYX2 175 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 OR8U8P0C7N1 319 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 NR4A1P22736 598 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 ADMP35318 185 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 FGF12P61328 243 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 FABP5Q01469 135 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 SPNS2Q8IVW8 549 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 SERPINA12Q8IW75 414 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 Q8N2B8 174 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 RELL2Q8NC24 303 aaPredicted RBP4.15□□□□□ -1.74
SCAF11-212ENST00000549162 OR5L1Q8NGL2 311 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 OR4A5Q8NH83 315 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 ZFAND1Q8TCF1 268 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 NEU4Q8WWR8 484 aaPredicted RBP4.15□□□□□ -1.74
SCAF11-212ENST00000549162 CREB3L1Q96BA8 519 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 ADOQ96SZ5 270 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 CACNG6Q9BXT2 260 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 CTDSP1Q9GZU7 261 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms