RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 RBM24Q9BX46 236 aaKnown RBP13□□□□□ -0.33
HOXC11-202ENST00000546378 FAM117AQ9C073 453 aa13□□□□□ -0.33
HOXC11-202ENST00000546378 PBOV1Q9GZY1 135 aa13□□□□□ -0.33
HOXC11-202ENST00000546378 SH3BGRL3Q9H299 93 aa13□□□□□ -0.33
HOXC11-202ENST00000546378 HEATR1Q9H583 2144 aaKnown RBP13□□□□□ -0.33
HOXC11-202ENST00000546378 DOCK11Q5JSL3 2073 aa13□□□□□ -0.33
HOXC11-202ENST00000546378 BOD1L1Q8NFC6 3051 aa13□□□□□ -0.33
HOXC11-202ENST00000546378 APOC1P02654 83 aa13□□□□□ -0.33
HOXC11-202ENST00000546378 ZNF735P0CB33 412 aa13□□□□□ -0.33
HOXC11-202ENST00000546378 FCGR2AP12318 317 aa13□□□□□ -0.33
HOXC11-202ENST00000546378 PGCP20142 388 aa13□□□□□ -0.33
HOXC11-202ENST00000546378 AWAT1Q58HT5 328 aa13□□□□□ -0.33
HOXC11-202ENST00000546378 SLC25A24Q6NUK1 477 aa13□□□□□ -0.33
HOXC11-202ENST00000546378 ZNF529Q6P280 563 aa13□□□□□ -0.33
HOXC11-202ENST00000546378 PEG10Q86TG7 708 aaKnown RBP13□□□□□ -0.33
HOXC11-202ENST00000546378 PDE7BQ9NP56 450 aa13□□□□□ -0.33
HOXC11-202ENST00000546378 TRAV36DV7A0A075B6V5 113 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 TRBV5-7A0A0A0MS05 114 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 OR6C65A6NJZ3 312 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 RAMP1O60894 148 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 ONECUT2O95948 504 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 ABCD3P28288 659 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 GUCA1AP43080 201 aaPredicted RBP12.99□□□□□ -0.33
HOXC11-202ENST00000546378 BLKP51451 505 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 ZNF141Q15928 474 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 NEK7Q8TDX7 302 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 GLYATL2Q8WU03 294 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 TCEAL3Q969E4 200 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 PFDN5Q99471 154 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 ZNF2Q9BSG1 426 aaPredicted RBP12.99□□□□□ -0.33
HOXC11-202ENST00000546378 LRRC61Q9BV99 259 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 PLEKHJ1Q9NW61 149 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 FBXL17Q9UF56 701 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 NDRG3Q9UGV2 375 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 TNFRSF10CO14798 259 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 RFC3P40938 356 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 SLC37A1P57057 533 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 ABCA11PQ4W5N1 156 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 OR5D14Q8NGL3 314 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 MRGPRFQ96AM1 343 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 PGAM5Q96HS1 289 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 NRIP2Q9BQI9 281 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 SUCNR1Q9BXA5 334 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 C5orf66Q9H5L9 145 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 BARX1Q9HBU1 254 aaPredicted RBP12.99□□□□□ -0.33
HOXC11-202ENST00000546378 BDP1A6H8Y1 2624 aa12.99□□□□□ -0.33
HOXC11-202ENST00000546378 MUC22E2RYF6 1773 aaPredicted RBP12.98□□□□□ -0.33
HOXC11-202ENST00000546378 EPHA1P21709 976 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 RPS16P62249 146 aaKnown RBP12.98□□□□□ -0.33
HOXC11-202ENST00000546378 PLXDC2Q6UX71 529 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 PRR18Q8N4B5 295 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 ZFP62Q8NB50 900 aaPredicted RBP12.98□□□□□ -0.33
HOXC11-202ENST00000546378 PHYHIPQ92561 330 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 PIGQQ9BRB3 760 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 EIF4E2O60573 245 aaKnown RBP12.98□□□□□ -0.33
HOXC11-202ENST00000546378 MTRF1O75570 445 aaKnown RBP12.98□□□□□ -0.33
HOXC11-202ENST00000546378 GUSBP08236 651 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 ZNF121P58317 390 aaPredicted RBP12.98□□□□□ -0.33
HOXC11-202ENST00000546378 EGR3Q06889 387 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 ZNF674Q2M3X9 581 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 ACTBL2Q562R1 376 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 ZNF343Q6P1L6 599 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 PAQR4Q8N4S7 273 aaPredicted RBP12.98□□□□□ -0.33
HOXC11-202ENST00000546378 TERB2Q8NHR7 220 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 RNF126Q9BV68 326 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 CUTCQ9NTM9 273 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 PLAC9Q5JTB6 97 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 CDPF1Q6NVV7 123 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 ZNF440Q8IYI8 595 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 MRPL24Q96A35 216 aaKnown RBP12.98□□□□□ -0.33
HOXC11-202ENST00000546378 FAM131CQ96AQ9 280 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 KIRREL1Q96J84 757 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 ZNF319Q9P2F9 582 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 C14orf166Q9Y224 244 aaKnown RBP12.98□□□□□ -0.33
HOXC11-202ENST00000546378 R4GMQ9 66 aa12.98□□□□□ -0.33
HOXC11-202ENST00000546378 ZNF749O43361 778 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 CD27P26842 260 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 DUSP1P28562 367 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 RPL12P30050 165 aaKnown RBP12.97□□□□□ -0.33
HOXC11-202ENST00000546378 PLA2G5P39877 138 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 PJVKQ0ZLH3 352 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 TMEM176BQ3YBM2 270 aaPredicted RBP12.97□□□□□ -0.33
HOXC11-202ENST00000546378 LINC00114Q6XXX2 140 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 SLC25A42Q86VD7 318 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 ERGIC1Q969X5 290 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 GPR173Q9NS66 373 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 PADI1Q9ULC6 663 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 RNF215Q9Y6U7 377 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 GDF9O60383 454 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 CST7O76096 145 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 CCR5P51681 352 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 TMEM33P57088 247 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 FOXF1Q12946 379 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 MEF2DQ14814 521 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 C9orf40Q8IXQ3 194 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 STT3BQ8TCJ2 826 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 METTL7AQ9H8H3 244 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 KIAA1549LQ6ZVL6 1849 aa12.97□□□□□ -0.33
HOXC11-202ENST00000546378 NCOA6Q14686 2063 aaPredicted RBP12.97□□□□□ -0.33
HOXC11-202ENST00000546378 CACNA1HO95180 2353 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms