RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 PDCD1Q15116 288 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 KLHL12Q53G59 568 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 PDLIM3Q53GG5 364 aaPredicted RBP6.98□□□□□ -1.29
USP28-215ENST00000545608 LINC01590Q5TEZ4 76 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 METTL11BQ5VVY1 283 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 TEX36Q5VZQ5 186 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 OLFML2AQ68BL7 652 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 C17orf107Q6ZR85 190 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 SLC16A9Q7RTY1 509 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 PRSS45Q7RTY3 260 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 PDZD9Q8IXQ8 264 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 LINC00471Q8N535 108 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 DRAXINQ8NBI3 349 aaPredicted RBP6.98□□□□□ -1.29
USP28-215ENST00000545608 AQP11Q8NBQ7 271 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 OR8S1Q8NH09 359 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 LRRC29Q8WV35 223 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 CCL13Q99616 98 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 CNTD2Q9H8S5 307 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 RNPEPL1Q9HAU8 725 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 TRIM36Q9NQ86 728 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 TBC1D23Q9NUY8 699 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 ARMC1Q9NVT9 282 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 C14orf119Q9NWQ9 140 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 CHCHD3Q9NX63 227 aaKnown RBP6.98□□□□□ -1.29
USP28-215ENST00000545608 ZNF319Q9P2F9 582 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 KAAG1Q9UBP8 84 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 LRRC42Q9Y546 428 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 POMT1Q9Y6A1 747 aa6.98□□□□□ -1.29
USP28-215ENST00000545608 hCG_38984A0A1B0GV85 526 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 TCRBV5S2A0A599 114 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.97□□□□□ -1.29
USP28-215ENST00000545608 GPR137BO60478 399 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 ECDO95905 644 aaPredicted RBP6.97□□□□□ -1.29
USP28-215ENST00000545608 IGHV4-59P01825 116 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 ANXA2P07355 339 aaKnown RBP6.97□□□□□ -1.29
USP28-215ENST00000545608 SLC15A1P46059 708 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 CX3CR1P49238 355 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 GRB2P62993 217 aaKnown RBP6.97□□□□□ -1.29
USP28-215ENST00000545608 PRB3Q04118 309 aaPredicted RBP6.97□□□□□ -1.29
USP28-215ENST00000545608 MZT1Q08AG7 82 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 EIF2B1Q14232 305 aaKnown RBP6.97□□□□□ -1.29
USP28-215ENST00000545608 MICAQ29983 383 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 WDR38Q5JTN6 314 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 C16orf89Q6UX73 402 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 WDR82Q6UXN9 313 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 FAM57BQ71RH2 274 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 RHOUQ7L0Q8 258 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 DPY19L4Q7Z388 723 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 ARHGAP24Q8N264 748 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 LY6G5BQ8NDX9 201 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 OR1M1Q8NGA1 313 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 OR6K6Q8NGW6 343 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 TBC1D15Q8TC07 691 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 SSMEM1Q8WWF3 244 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 ST8SIA4Q92187 359 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 REEP6Q96HR9 211 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 AMELYQ99218 206 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 CITED1Q99966 193 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 ABHD6Q9BV23 337 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 DGCR6LQ9BY27 220 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 YIPF3Q9GZM5 350 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 OPA3Q9H6K4 179 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 MED20Q9H944 212 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 ACTR3BQ9P1U1 418 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 KIF17Q9P2E2 1029 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 RPUSD1Q9UJJ7 312 aaKnown RBP6.97□□□□□ -1.29
USP28-215ENST00000545608 BAIAP2Q9UQB8 552 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 RHBDD3Q9Y3P4 386 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 U3KQV3 271 aa6.97□□□□□ -1.29
USP28-215ENST00000545608 FAM183AA6NL82 134 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 ACOT8O14734 319 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 CDIPTO14735 213 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 MUC1P15941 1255 aaPredicted RBP6.96□□□□□ -1.3
USP28-215ENST00000545608 CALB2P22676 271 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 HSD11B1P28845 292 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 GRK5P34947 590 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 IER3P46695 156 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 TGM4P49221 684 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 GSK3AP49840 483 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 DLX1P56177 255 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 ZNF121P58317 390 aaPredicted RBP6.96□□□□□ -1.3
USP28-215ENST00000545608 MS4A2Q01362 244 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 KPNB1Q14974 876 aaKnown RBP6.96□□□□□ -1.3
USP28-215ENST00000545608 TIGD6Q17RP2 521 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 MICBQ29980 383 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 SPATS1Q496A3 300 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 CDONQ4KMG0 1287 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 MIDNQ504T8 468 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 OR2T5Q6IEZ7 315 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 VMO1Q7Z5L0 202 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 LDLRAD3Q86YD5 345 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 ERI1Q8IV48 349 aaKnown RBP6.96□□□□□ -1.3
USP28-215ENST00000545608 IQCF1Q8N6M8 205 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 FAM216BQ8N7L0 139 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 SCCPDHQ8NBX0 429 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 OR2T33Q8NG76 320 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 OR5T2Q8NGG2 359 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 OR6N2Q8NGY6 317 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 OR2T29Q8NH02 315 aa6.96□□□□□ -1.3
USP28-215ENST00000545608 LINC01006Q8NI28 216 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms