RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 DOCK11Q5JSL3 2073 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 IGHV2-70DA0A0C4DH43 119 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 ZNF850A8MQ14 1090 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 C3orf80F5H4A9 247 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 H3BNX3 289 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 TRAPPC2LH3BP13 241 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 M0R129 80 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 EI24O14681 340 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 ENSAO43768 121 aaKnown RBP9.86□□□□□ -0.83
HDAC4-216ENST00000544989 MPZL2O60487 215 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 DHRS3O75911 302 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 ECDO95905 644 aaPredicted RBP9.86□□□□□ -0.83
HDAC4-216ENST00000544989 AVPP01185 164 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 ACKR3P25106 362 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 SEC61A1P61619 476 aaKnown RBP9.86□□□□□ -0.83
HDAC4-216ENST00000544989 SNRPGP62308 76 aaKnown RBP9.86□□□□□ -0.83
HDAC4-216ENST00000544989 GNG3P63215 75 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 ACTC1P68032 377 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 ACTA1P68133 377 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 PAX8Q06710 450 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 PRDX4Q13162 271 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 CEACAM21Q3KPI0 293 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 WDR25Q64LD2 544 aaPredicted RBP9.86□□□□□ -0.83
HDAC4-216ENST00000544989 PLEKHG7Q6ZR37 379 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 C1orf229Q6ZS94 237 aaPredicted RBP9.86□□□□□ -0.83
HDAC4-216ENST00000544989 KCTD8Q6ZWB6 473 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 BCDIN3DQ7Z5W3 292 aaKnown RBP9.86□□□□□ -0.83
HDAC4-216ENST00000544989 BOLLQ8N9W6 283 aaKnown RBP9.86□□□□□ -0.83
HDAC4-216ENST00000544989 LRRC29Q8WV35 223 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 PIGCQ92535 297 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 LYZL4Q96KX0 146 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 DNTTIP1Q9H147 329 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 MMP26Q9NRE1 261 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 KAAG1Q9UBP8 84 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 OPN4Q9UHM6 478 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 PCDHGB1Q9Y5G3 927 aa9.86□□□□□ -0.83
HDAC4-216ENST00000544989 KIR2DS1A0A191URI9 304 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 METTL15A6NJ78 407 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 OR5B21A6NL26 309 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 PSMD9O00233 223 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 GPR37O15354 613 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 ADAM20O43506 726 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 FSHBP01225 129 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 IGLV3-1P01715 115 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 POLR2IP36954 125 aaKnown RBP9.85□□□□□ -0.83
HDAC4-216ENST00000544989 MTNR1AP48039 350 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 BPIFB3P59826 476 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 PAX2Q02962 417 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 FAM201AQ5SY85 155 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 SFRP4Q6FHJ7 346 aaPredicted RBP9.85□□□□□ -0.83
HDAC4-216ENST00000544989 WDR82Q6UXN9 313 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 RBMS3Q6XE24 437 aaKnown RBP9.85□□□□□ -0.83
HDAC4-216ENST00000544989 SLC36A1Q7Z2H8 476 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 FAM220AQ7Z4H9 259 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 KCTD20Q7Z5Y7 419 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 EGFL6Q8IUX8 553 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 ELMOD2Q8IZ81 293 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 CBR4Q8N4T8 237 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 GCSAMQ8N6F7 178 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 YIPF7Q8N8F6 280 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 PNLDC1Q8NA58 520 aaKnown RBP9.85□□□□□ -0.83
HDAC4-216ENST00000544989 OR5A2Q8NGI9 324 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 OR51E1Q8TCB6 317 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 STMN2Q93045 179 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 RNF170Q96K19 258 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 DMRTB1Q96MA1 342 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 Q96MT0 163 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 TECTBQ96PL2 329 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 APOL4Q9BPW4 351 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 NUDT16L1Q9BRJ7 211 aaKnown RBP9.85□□□□□ -0.83
HDAC4-216ENST00000544989 S100A14Q9HCY8 104 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 GPR84Q9NQS5 396 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 OR52A1Q9UKL2 312 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 NUP50Q9UKX7 468 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 GTF2A1LQ9UNN4 478 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 PIGLQ9Y2B2 252 aa9.85□□□□□ -0.83
HDAC4-216ENST00000544989 A0A1W2PQL4 384 aaPredicted RBP9.84□□□□□ -0.83
HDAC4-216ENST00000544989 SRRM5B3KS81 715 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 TRIM77I1YAP6 450 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 DLGAP1O14490 977 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 CDIPTO14735 213 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 TNFRSF13BO14836 293 aaPredicted RBP9.84□□□□□ -0.83
HDAC4-216ENST00000544989 SRSF10O75494 262 aaKnown RBP9.84□□□□□ -0.83
HDAC4-216ENST00000544989 RPSAP08865 295 aaKnown RBP9.84□□□□□ -0.83
HDAC4-216ENST00000544989 CD80P33681 288 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 HILS1P60008 231 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 HNRNPA0Q13151 305 aaKnown RBP9.84□□□□□ -0.83
HDAC4-216ENST00000544989 OCLNQ16625 522 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 KRTAP24-1Q3LI83 254 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 CLVS2Q5SYC1 327 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 ZNF684Q5T5D7 378 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 ZNF841Q6ZN19 808 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 ZBTB49Q6ZSB9 765 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 ZNF826PQ6ZT77 177 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 DOK3Q7L591 496 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 FAM90A1Q86YD7 464 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 PHC2Q8IXK0 858 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 C11orf53Q8IXP5 236 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 PQLC1Q8N2U9 271 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 OR10H4Q8NGA5 316 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms