RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 SLC22A8Q8TCC7 542 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 OR10A2Q9H208 303 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 HMSDA8MTL9 139 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 H0YIZ8 118 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 CSTBP04080 98 aaKnown RBP11.92□□□□□ -0.5
PTPN1-202ENST00000541713 KLK3P07288 261 aaPredicted RBP11.92□□□□□ -0.5
PTPN1-202ENST00000541713 PSMB6P28072 239 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 RPL35P42766 123 aaKnown RBP11.92□□□□□ -0.5
PTPN1-202ENST00000541713 HNF4GQ14541 408 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 PDSS1Q5T2R2 415 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 FDX2Q6P4F2 183 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 SUMF1Q8NBK3 374 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 CADM4Q8NFZ8 388 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 TERB2Q8NHR7 220 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 UBALD1Q8TB05 177 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 TTC9Q92623 222 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 ZNF768Q9H5H4 540 aaKnown RBP11.92□□□□□ -0.5
PTPN1-202ENST00000541713 C5orf66Q9H5L9 145 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 C12orf10Q9HB07 376 aa11.92□□□□□ -0.5
PTPN1-202ENST00000541713 ZNF17P17021 662 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 RBMXP38159 391 aaKnown RBP11.91□□□□□ -0.5
PTPN1-202ENST00000541713 RBM39Q14498 530 aaKnown RBP11.91□□□□□ -0.5
PTPN1-202ENST00000541713 MEF2DQ14814 521 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 PCK2Q16822 640 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 IFI44Q8TCB0 444 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 C2CD4CQ8TF44 421 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 CRLF2Q9HC73 371 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 F8W036 122 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 TLX3O43711 291 aaPredicted RBP11.91□□□□□ -0.5
PTPN1-202ENST00000541713 HIST1H1DP16402 221 aaKnown RBP11.91□□□□□ -0.5
PTPN1-202ENST00000541713 ZP3P21754 424 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 BLOC1S1P78537 153 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 ALKBH2Q6NS38 261 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 NKAIN3Q8N8D7 197 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 CDC6Q99741 560 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 CXCL13O43927 109 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 B3GALNT1O75752 331 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 WIPI1Q5MNZ9 446 aaPredicted RBP11.91□□□□□ -0.5
PTPN1-202ENST00000541713 C1orf100Q5SVJ3 147 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 OR2A2Q6IF42 318 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 SLC23A3Q6PIS1 610 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 MEX3BQ6ZN04 569 aaKnown RBP11.91□□□□□ -0.5
PTPN1-202ENST00000541713 SLC25A42Q86VD7 318 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 NUBPLQ8TB37 319 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 PIGCQ92535 297 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 WBP1Q96G27 269 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 ZNF2Q9BSG1 426 aaPredicted RBP11.91□□□□□ -0.5
PTPN1-202ENST00000541713 TNFSF18Q9UNG2 199 aa11.91□□□□□ -0.5
PTPN1-202ENST00000541713 PTGDSP41222 190 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 ACOT7LQ6ZUV0 252 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 PGAP1Q75T13 922 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 MYPOPQ86VE0 399 aaPredicted RBP11.9□□□□□ -0.5
PTPN1-202ENST00000541713 NAXDQ8IW45 347 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 ZSCAN4Q8NAM6 433 aaPredicted RBP11.9□□□□□ -0.5
PTPN1-202ENST00000541713 OR6K3Q8NGY3 331 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 OR13G1Q8NGZ3 307 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 KCNG3Q8TAE7 436 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 LYZL4Q96KX0 146 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 SCPEP1Q9HB40 452 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 NBASA2RRP1 2371 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 M0R135 149 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 HPP00738 406 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 IFI6P09912 130 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 RPA2P15927 270 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 AGTR1P30556 359 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 PTGFRP43088 359 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 ZNF799Q96GE5 643 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 MRGPRX4Q96LA9 322 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 URM1Q9BTM9 101 aaKnown RBP11.9□□□□□ -0.5
PTPN1-202ENST00000541713 C20orf24Q9BUV8 137 aa11.9□□□□□ -0.5
PTPN1-202ENST00000541713 MRPL13Q9BYD1 178 aaKnown RBP11.9□□□□□ -0.5
PTPN1-202ENST00000541713 A0A0J9YW62 118 aa11.9□□□□□ -0.51
PTPN1-202ENST00000541713 DHRS7CA6NNS2 312 aa11.9□□□□□ -0.51
PTPN1-202ENST00000541713 LDLRAD4O15165 306 aa11.9□□□□□ -0.51
PTPN1-202ENST00000541713 RFPL3SP0C7P2 107 aa11.9□□□□□ -0.51
PTPN1-202ENST00000541713 CNR1P21554 472 aa11.9□□□□□ -0.51
PTPN1-202ENST00000541713 PIGYQ3MUY2 71 aa11.9□□□□□ -0.51
PTPN1-202ENST00000541713 SPEM1Q8N4L4 309 aa11.9□□□□□ -0.51
PTPN1-202ENST00000541713 OR5L1Q8NGL2 311 aa11.9□□□□□ -0.51
PTPN1-202ENST00000541713 UCK1Q9HA47 277 aa11.9□□□□□ -0.51
PTPN1-202ENST00000541713 RABL2AQ9UBK7 228 aaPredicted RBP11.9□□□□□ -0.51
PTPN1-202ENST00000541713 RABL2BQ9UNT1 228 aa11.9□□□□□ -0.51
PTPN1-202ENST00000541713 AQP8O94778 261 aa11.89□□□□□ -0.51
PTPN1-202ENST00000541713 OMGP23515 440 aa11.89□□□□□ -0.51
PTPN1-202ENST00000541713 NFYBP25208 207 aa11.89□□□□□ -0.51
PTPN1-202ENST00000541713 RSU1Q15404 277 aa11.89□□□□□ -0.51
PTPN1-202ENST00000541713 IAH1Q2TAA2 248 aaPredicted RBP11.89□□□□□ -0.51
PTPN1-202ENST00000541713 RPL7L1Q6DKI1 246 aaKnown RBP11.89□□□□□ -0.51
PTPN1-202ENST00000541713 ETV3LQ6ZN32 361 aa11.89□□□□□ -0.51
PTPN1-202ENST00000541713 NEK7Q8TDX7 302 aa11.89□□□□□ -0.51
PTPN1-202ENST00000541713 ZNF845Q96IR2 970 aaPredicted RBP11.89□□□□□ -0.51
PTPN1-202ENST00000541713 OXGR1Q96P68 337 aa11.89□□□□□ -0.51
PTPN1-202ENST00000541713 MCTS1Q9ULC4 181 aaKnown RBP11.89□□□□□ -0.51
PTPN1-202ENST00000541713 TP53I11O14683 189 aa11.89□□□□□ -0.51
PTPN1-202ENST00000541713 BCL2L11O43521 198 aa11.89□□□□□ -0.51
PTPN1-202ENST00000541713 BPNT1O95861 308 aa11.89□□□□□ -0.51
PTPN1-202ENST00000541713 HPNP05981 417 aa11.89□□□□□ -0.51
PTPN1-202ENST00000541713 EPHA8P29322 1005 aaPredicted RBP11.89□□□□□ -0.51
PTPN1-202ENST00000541713 THRSPQ92748 146 aa11.89□□□□□ -0.51
PTPN1-202ENST00000541713 HLA-CQ95604 372 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms