RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, human

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-218	ENST00000541615		Q6ZN92	141 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	LRRC69	Q6ZNQ3	347 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	LCNL1	Q6ZST4	164 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	PARS2	Q7L3T8	475 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	MOB1B	Q7L9L4	216 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	DOLPP1	Q86YN1	238 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	C1orf210	Q8IVY1	113 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	GPD1L	Q8N335	351 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	CISD2	Q8N5K1	135 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	IQCF1	Q8N6M8	205 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	STPG4	Q8N801	248 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	ZFP41	Q8N8Y5	198 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	POC1A	Q8NBT0	407 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	ZNF485	Q8NCK3	441 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	OR4X1	Q8NH49	305 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	VN1R17P	Q8TDU5	208 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	GPR148	Q8TDV2	347 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	DOK4	Q8TEW6	326 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	DCAF4	Q8WV16	495 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	LINC01599	Q8WXQ3	324 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	DCUN1D4	Q92564	292 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	PTH2	Q96A98	100 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	TMEM45B	Q96B21	275 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	DAZAP1	Q96EP5	407 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	ATXN7L3B	Q96GX2	97 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	HHIPL1	Q96JK4	782 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	MRPL45	Q9BRJ2	306 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	PYGO2	Q9BRQ0	406 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	CABLES2	Q9BTV7	478 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	NUDT9	Q9BW91	350 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	SLC39A8	Q9C0K1	460 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	WDR13	Q9H1Z4	485 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	ZDHHC11	Q9H8X9	412 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	PATZ1	Q9HBE1	687 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	ZNF160	Q9HCG1	818 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	MRPL17	Q9NRX2	175 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	GPATCH2	Q9NW75	528 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	TAS2R16	Q9NYV7	291 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	AHSP	Q9NZD4	102 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	DNAJC27	Q9NZQ0	273 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	MCTS1	Q9ULC4	181 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	PTGDR2	Q9Y5Y4	395 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	HCFC2	Q9Y5Z7	792 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	LOXHD1	Q8IVV2	1947 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	COL24A1	Q17RW2	1714 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615		A0A0G2JMM0	328 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	TRBV2	A0A0J9YWF9	115 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	hCG_38984	A0A1B0GV85	526 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615		A0A1W2PPB8	328 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	TMEM189	A5PLL7	270 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615		A6NDN8	102 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	SLC22A20	A6NK97	555 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	KIR3DP1	A8MWS1	328 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	GAPDHS	O14556	408 aa	Predicted RBP	4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	AGPAT2	O15120	278 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	ATXN7	O15265	892 aa	Predicted RBP	4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	CD5L	O43866	347 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	TMPRSS11D	O60235	418 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	BNIP3L	O60238	219 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	TMEM50A	O95807	157 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	GPANK1	O95872	356 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	HBE1	P02100	147 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	REG1A	P05451	166 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	CXCL1	P09341	107 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	FTH1P19	P0C7X4	201 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	DANCR	P0C864	163 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	VSIG10L2	P0DP72	767 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	PSG1	P11464	419 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	PTHLH	P12272	177 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	CEL	P19835	753 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	CR2	P20023	1033 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	USF1	P22415	310 aa	Predicted RBP	4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	GJA4	P35212	333 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	BSG	P35613	385 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	WAS	P42768	502 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	LPAR6	P43657	344 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	PPIC	P45877	212 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	GYG1	P46976	350 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	PRLHR	P49683	370 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	MVD	P53602	400 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	TCTA	P57738	103 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	TAS2R31	P59538	309 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	HLA-DRB3	P79483	266 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	LCN2	P80188	198 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	TGIF1	Q15583	401 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	SLC10A6	Q3KNW5	377 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	ZNF658B	Q4V348	819 aa	Predicted RBP	4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	ACSM3	Q53FZ2	586 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	PHF19	Q5T6S3	580 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	DCAF12L2	Q5VW00	463 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	SLC8B1	Q6J4K2	584 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	NIPAL3	Q6P499	406 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	INO80C	Q6PI98	192 aa	Predicted RBP	4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	NPNT	Q6UXI9	565 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615		Q6ZRG5	221 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	C15orf39	Q6ZRI6	1047 aa		4.62	□□□□□ -1.67
SNHG1-218	ENST00000541615	OLIG3	Q7RTU3	272 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms