RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 TECTAO75443 2155 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 F8W036 122 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 NTN3O00634 580 aaPredicted RBP11.02□□□□□ -0.64
RNF4-222ENST00000541204 TP53I11O14683 189 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 SCGNO76038 276 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 TBPP20226 339 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 CX3CR1P49238 355 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 TAS2R31P59538 309 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 BLOC1S1P78537 153 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 GFOD2Q3B7J2 385 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 ZNF468Q5VIY5 522 aaPredicted RBP11.02□□□□□ -0.64
RNF4-222ENST00000541204 RAET1LQ5VY80 246 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 ZNF529Q6P280 563 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 HAGHLQ6PII5 290 aaPredicted RBP11.02□□□□□ -0.64
RNF4-222ENST00000541204 CLEC18BQ6UXF7 455 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 ABHD12BQ7Z5M8 362 aaPredicted RBP11.02□□□□□ -0.64
RNF4-222ENST00000541204 SLC30A7Q8NEW0 376 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 RNF138Q8WVD3 245 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 ZNF629Q9UEG4 869 aaPredicted RBP11.02□□□□□ -0.64
RNF4-222ENST00000541204 EML6Q6ZMW3 1958 aa11.02□□□□□ -0.64
RNF4-222ENST00000541204 H7C2Y5 167 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 RAD51DO75771 328 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 CD79AP11912 226 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 ZNF43P17038 809 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 OTX2P32243 289 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 GSK3AP49840 483 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 ZFP36L1Q07352 338 aaKnown RBP11.02□□□□□ -0.65
RNF4-222ENST00000541204 SCRN3Q0VDG4 424 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 RNF141Q8WVD5 230 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 TLNRD1Q9H1K6 362 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 WDR54Q9H977 334 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 OR5AC2Q9NZP5 309 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 GPR132Q9UNW8 380 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 LHFPL6Q9Y693 200 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 RTTNQ86VV8 2226 aa11.02□□□□□ -0.65
RNF4-222ENST00000541204 TRBV6-7A0A0A0MS04 114 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 NSG1A0A0A6YYJ2 146 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 YKT6O15498 198 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 CDC14BO60729 498 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 DKK1O94907 266 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 ONECUT2O95948 504 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 LAP3P28838 519 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 DUSP3P51452 185 aaPredicted RBP11.01□□□□□ -0.65
RNF4-222ENST00000541204 TMEM50BP56557 158 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 TMEM200AQ86VY9 491 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 OR5AS1Q8N127 324 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 OR4A4PQ8NGN8 299 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 OR6S1Q8NH40 331 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 RHBDD1Q8TEB9 315 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 ARL11Q969Q4 196 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 C1orf147Q96MC9 270 aaPredicted RBP11.01□□□□□ -0.65
RNF4-222ENST00000541204 IER2Q9BTL4 223 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 TMEM100Q9NV29 134 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 ZNF319Q9P2F9 582 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 ASH2LQ9UBL3 628 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 NXT1Q9UKK6 140 aaKnown RBP11.01□□□□□ -0.65
RNF4-222ENST00000541204 LHX6Q9UPM6 363 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 ZNF175Q9Y473 711 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 IGHG1P01857 330 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 CHRM2P08172 466 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 HIST1H1DP16402 221 aaKnown RBP11.01□□□□□ -0.65
RNF4-222ENST00000541204 P2RY4P51582 365 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 CYCSP99999 105 aaKnown RBP11.01□□□□□ -0.65
RNF4-222ENST00000541204 HFEQ30201 348 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 ARHGAP5-AS1Q96IT6 56 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 FAM71F1Q96KD3 344 aaPredicted RBP11.01□□□□□ -0.65
RNF4-222ENST00000541204 IMMP1LQ96LU5 166 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 TREM1Q9NP99 234 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 OR2S2Q9NQN1 319 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 FBLN5Q9UBX5 448 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 MLXQ9UH92 298 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 AHCTF1Q8WYP5 2266 aa11.01□□□□□ -0.65
RNF4-222ENST00000541204 NPIPB13A6NJU9 1138 aa11□□□□□ -0.65
RNF4-222ENST00000541204 NPIPB4C9JG80 1138 aa11□□□□□ -0.65
RNF4-222ENST00000541204 RER1O15258 196 aa11□□□□□ -0.65
RNF4-222ENST00000541204 TRAF3IP2O43734 574 aaPredicted RBP11□□□□□ -0.65
RNF4-222ENST00000541204 SFT2D2O95562 160 aa11□□□□□ -0.65
RNF4-222ENST00000541204 HCKP08631 526 aa11□□□□□ -0.65
RNF4-222ENST00000541204 QDPRP09417 244 aa11□□□□□ -0.65
RNF4-222ENST00000541204 H2AFB1P0C5Y9 115 aa11□□□□□ -0.65
RNF4-222ENST00000541204 PGA4P0DJD7 388 aa11□□□□□ -0.65
RNF4-222ENST00000541204 PGA3P0DJD8 388 aa11□□□□□ -0.65
RNF4-222ENST00000541204 CLDN17P56750 224 aa11□□□□□ -0.65
RNF4-222ENST00000541204 ANKRD55Q3KP44 614 aa11□□□□□ -0.65
RNF4-222ENST00000541204 H3F3CQ6NXT2 135 aa11□□□□□ -0.65
RNF4-222ENST00000541204 OR8B12Q8NGG6 310 aa11□□□□□ -0.65
RNF4-222ENST00000541204 NUDT16L1Q9BRJ7 211 aaKnown RBP11□□□□□ -0.65
RNF4-222ENST00000541204 TMEM59Q9BXS4 323 aa11□□□□□ -0.65
RNF4-222ENST00000541204 MRPL13Q9BYD1 178 aaKnown RBP11□□□□□ -0.65
RNF4-222ENST00000541204 GPR84Q9NQS5 396 aa11□□□□□ -0.65
RNF4-222ENST00000541204 NDRG3Q9UGV2 375 aa11□□□□□ -0.65
RNF4-222ENST00000541204 FLVCR1Q9Y5Y0 555 aa11□□□□□ -0.65
RNF4-222ENST00000541204 IGLV3-32A0A0A0MS00 114 aa11□□□□□ -0.65
RNF4-222ENST00000541204 ZNF726A6NNF4 738 aa11□□□□□ -0.65
RNF4-222ENST00000541204 ZNF705EA8MWA4 302 aaPredicted RBP11□□□□□ -0.65
RNF4-222ENST00000541204 ZNF878C9JN71 531 aa11□□□□□ -0.65
RNF4-222ENST00000541204 CRTAPO75718 401 aaPredicted RBP11□□□□□ -0.65
RNF4-222ENST00000541204 HTR3BO95264 441 aa11□□□□□ -0.65
RNF4-222ENST00000541204 FAM157CP0CG43 387 aa11□□□□□ -0.65
RNF4-222ENST00000541204 FOLR3P41439 243 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms