RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 GPER1Q99527 375 aa10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 REPIN1Q9BWE0 567 aaKnown RBP10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 HRASLSQ9HDD0 168 aa10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 DIABLOQ9NR28 239 aa10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 ZNF629Q9UEG4 869 aaPredicted RBP10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 RAB22AQ9UL26 194 aa10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 DSPP15924 2871 aaKnown RBP10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 FAM240BA0A1B0GVZ2 78 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 FAM230AA0A1W2PPH8 454 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 TMEM235A6NFC5 223 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 DHRS7CA6NNS2 312 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 XRCC2O43543 280 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 ANGPTL7O43827 346 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 CDC14BO60729 498 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 ALX3O95076 343 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 MPIG6BO95866 241 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 SERPINA5P05154 406 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 NAT2P11245 290 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 PTGFRP43088 359 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 IDH3GP51553 393 aaPredicted RBP10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 PER3P56645 1201 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 RAB25P57735 213 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 OR2A2Q6IF42 318 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 MZT2BQ6NZ67 158 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 SLC30A7Q8NEW0 376 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 FAM57AQ8TBR7 257 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 TNFAIP8L1Q8WVP5 186 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 FCAMRQ8WWV6 532 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 AKAP1Q92667 903 aaKnown RBP eCLIP10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 PTX4Q96A99 478 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 C10orf35Q96D05 121 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 ITPKCQ96DU7 683 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 CNTNAP3BQ96NU0 1288 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 CNTNAP3Q9BZ76 1288 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 ZNF581Q9P0T4 197 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 FBLN5Q9UBX5 448 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 ING4Q9UNL4 249 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 ACACBO00763 2458 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 ANKRD20A5PA0PJZ0 165 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 SOCS1O15524 211 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 SPRY1O43609 319 aaPredicted RBP10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 PLATP00750 562 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 NRASP01111 189 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 GIFP27352 417 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 APLNRP35414 380 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 VEGFCP49767 419 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 ERVS71-1P61550 626 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 PLP2Q04941 152 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 ZNF260Q3ZCT1 412 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 SLC22A6Q4U2R8 563 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 CLVS2Q5SYC1 327 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 SPATA46Q5T0L3 261 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 HACD4Q5VWC8 232 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 ZNF474Q6S9Z5 364 aaPredicted RBP10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 MOB3CQ70IA8 216 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 ZNF554Q86TJ5 538 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 CDH26Q8IXH8 852 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 CCDC54Q8NEL0 328 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 GPX8Q8TED1 209 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 PIGCQ92535 297 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 APOBEC3DQ96AK3 386 aaPredicted RBP10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 SEH1LQ96EE3 360 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 RGCCQ9H4X1 137 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 PROCRQ9UNN8 238 aa10.58□□□□□ -0.72
AP003559.1-201ENST00000540906 IGKV1-12A0A0C4DH73 117 aa10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 ZNF850A8MQ14 1090 aa10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 H7C417 338 aa10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 WDR1O75083 606 aa10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 IGKV1D-12P01611 117 aa10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 PLAC9Q5JTB6 97 aa10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 RSBN1Q5VWQ0 802 aaPredicted RBP10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 SFRP4Q6FHJ7 346 aaPredicted RBP10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 OR4D10Q8NGI6 311 aa10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 HPSE2Q8WWQ2 592 aa10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 AQP3Q92482 292 aa10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 SNRNP40Q96DI7 357 aaKnown RBP10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 WBP1Q96G27 269 aa10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 CCDC120Q96HB5 630 aa10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 RABL2AQ9UBK7 228 aaPredicted RBP10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 MTFP1Q9UDX5 166 aa10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 RABL2BQ9UNT1 228 aa10.57□□□□□ -0.72
AP003559.1-201ENST00000540906 ZNF816-ZNF321PA0A0X1KG74 233 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 CRTAPO75718 401 aaPredicted RBP10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 GLI4P10075 376 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 GNB3P16520 340 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 SERPINA2P20848 420 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 PRSS3P35030 304 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 MTCP1P56278 107 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 TMEM50BP56557 158 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 UBE2NP61088 152 aaKnown RBP10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 MRPS10P82664 201 aaKnown RBP10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 KRTCAP3Q53RY4 240 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 AGAP6Q5VW22 663 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 PLCXD3Q63HM9 321 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 PLET1Q6UQ28 207 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 Q6ZTK2 550 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 OR2W3Q7Z3T1 314 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 ZGRF1Q86YA3 2104 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 DOLPP1Q86YN1 238 aa10.56□□□□□ -0.72
AP003559.1-201ENST00000540906 BATF2Q8N1L9 274 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms