RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 PRF1P14222 555 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 ZNF93P35789 620 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-204ENST00000540846 SRP9P49458 86 aaKnown RBP10.81□□□□□ -0.68
SMAD3-204ENST00000540846 CDSNQ15517 529 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 C4orf17Q53FE4 359 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 PLA1AQ53H76 456 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 MRGPRGQ86SM5 289 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 OR1K1Q8NGR3 316 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 BCL2L2Q92843 193 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-204ENST00000540846 GCDHQ92947 438 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-204ENST00000540846 SGK3Q96BR1 496 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 MARVELD1Q9BSK0 173 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 CHST5Q9GZS9 411 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 RGCCQ9H4X1 137 aa10.81□□□□□ -0.68
SMAD3-204ENST00000540846 USP9XQ93008 2570 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-204ENST00000540846 A0A0B4J293 547 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 MEIOCA2RUB1 952 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 CENPXA8MT69 81 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 BOLA2-SMG1P6H3BVE0 249 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 ECDO95905 644 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-204ENST00000540846 LCATP04180 440 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 FAHP16930 419 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 CCKARP32238 428 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 AP3S2P59780 193 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 P2RY6Q15077 328 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 GABRA6Q16445 453 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 MTFR2Q6P444 385 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 COLCA1Q6ZS62 124 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 BEND4Q6ZU67 534 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 DPPA2Q7Z7J5 298 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 GLCCI1Q86VQ1 547 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 CPEB3Q8NE35 698 aaKnown RBP10.8□□□□□ -0.68
SMAD3-204ENST00000540846 PRR7Q8TB68 274 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 CREB3L1Q96BA8 519 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 PHF21AQ96BD5 680 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 UPRTQ96BW1 309 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 REEP6Q96HR9 211 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 ATG5Q9H1Y0 275 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 B3GNT2Q9NY97 397 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 NLKQ9UBE8 527 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 RAB22AQ9UL26 194 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 HCFC1P51610 2035 aa10.8□□□□□ -0.68
SMAD3-204ENST00000540846 A0A096LPE4 126 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 A0A1B0GUH1 482 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 A0A1W2PPZ6 126 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 LYZL6O75951 148 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 ARR3P36575 388 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 UNC119Q13432 240 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 TSC22D1Q15714 1073 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 HIKESHIQ53FT3 197 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 OR2W3Q7Z3T1 314 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 CXorf67Q86X51 503 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-204ENST00000540846 C1orf162Q8NEQ5 155 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-204ENST00000540846 SEMA6DQ8NFY4 1073 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 OR2AE1Q8NHA4 323 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 C1orf147Q96MC9 270 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-204ENST00000540846 C1QTNF5Q9BXJ0 243 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 NOX3Q9HBY0 568 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 PIGLQ9Y2B2 252 aa10.79□□□□□ -0.68
SMAD3-204ENST00000540846 TRAV18A0A075B6X5 111 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 hCG_38984A0A1B0GV85 526 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 ANKRD20A5PA0PJZ0 165 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 TMEM14DPA8MWL7 114 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 EEF1E1-BLOC1S5C9J1V9 151 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 H7C417 338 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 XRCC2O43543 280 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 HLA-HP01893 362 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 HCKP08631 526 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 TRAPPC2P0DI81 140 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 TRAPPC2BP0DI82 140 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 VSIG8P0DPA2 414 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 PTHLHP12272 177 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 PSMB1P20618 241 aaKnown RBP10.78□□□□□ -0.68
SMAD3-204ENST00000540846 ACKR3P25106 362 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 CHRNB4P30926 498 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 CD300CQ08708 224 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 TBRG1Q3YBR2 411 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 FBXL19-AS1Q494R0 122 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 RSBN1Q5VWQ0 802 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-204ENST00000540846 OLFML2AQ68BL7 652 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 AWAT2Q6E213 333 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 OR10K2Q6IF99 312 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 RAB12Q6IQ22 244 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 TMEM53Q6P2H8 277 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 CRIP3Q6Q6R5 217 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 RNF144BQ7Z419 303 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 AKAP14Q86UN6 197 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 PAQR4Q8N4S7 273 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-204ENST00000540846 DEDD2Q8WXF8 326 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 SPSB4Q96A44 273 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 ZNF75AQ96N20 296 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 NUDT16L1Q9BRJ7 211 aaKnown RBP10.78□□□□□ -0.68
SMAD3-204ENST00000540846 DPAGT1Q9H3H5 408 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 COPZ2Q9P299 210 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 MTFP1Q9UDX5 166 aa10.78□□□□□ -0.68
SMAD3-204ENST00000540846 MRPS28Q9Y2Q9 187 aaKnown RBP10.78□□□□□ -0.68
SMAD3-204ENST00000540846 LOC100509620A0A075B734 347 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 NAP1L6A6NFF2 107 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 RAD51DO75771 328 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 SCGNO76038 276 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms