RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 JMJD6Q6NYC1 403 aaPredicted RBP12.25□□□□□ -0.45
LIMK1-208ENST00000538333 OR1F12Q8NHA8 337 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 HAS2Q92819 552 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 CPNE4Q96A23 557 aaPredicted RBP12.25□□□□□ -0.45
LIMK1-208ENST00000538333 SIGLEC12Q96PQ1 595 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 OCSTAMPQ9BR26 566 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.25□□□□□ -0.45
LIMK1-208ENST00000538333 BOKQ9UMX3 212 aaPredicted RBP12.25□□□□□ -0.45
LIMK1-208ENST00000538333 MAB21L2Q9Y586 359 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 LOC100509620A0A075B734 347 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 ARPC5O15511 151 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 HLA-AP01891 365 aaKnown RBP12.24□□□□□ -0.45
LIMK1-208ENST00000538333 LIPCP11150 499 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 ZNF32P17041 273 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 SCRN3Q0VDG4 424 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 PPP1R1AQ13522 171 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 MICBQ29980 383 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 ESCO2Q56NI9 601 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 LYG2Q86SG7 212 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 STEAP2Q8NFT2 490 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 OR2M7Q8NG81 312 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 OR5M8Q8NGP6 311 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 OR4K15Q8NH41 348 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 ADAMTS17Q8TE56 1095 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 ABHD3Q8WU67 409 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 FOXB1Q99853 325 aa12.24□□□□□ -0.45
LIMK1-208ENST00000538333 ZNF703Q9H7S9 590 aaPredicted RBP12.24□□□□□ -0.45
LIMK1-208ENST00000538333 TRAV14DV4A0A0A6YYC5 116 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 CD8AP01732 235 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 PMP2P02689 132 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 FCGR2AP12318 317 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 MGMTP16455 207 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 S100A11P31949 105 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 GK2Q14410 553 aaPredicted RBP12.23□□□□□ -0.45
LIMK1-208ENST00000538333 CEACAM16Q2WEN9 425 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 VAX1Q5SQQ9 334 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 THOC7Q6I9Y2 204 aaKnown RBP12.23□□□□□ -0.45
LIMK1-208ENST00000538333 FAHD2BQ6P2I3 314 aaPredicted RBP12.23□□□□□ -0.45
LIMK1-208ENST00000538333 HOGA1Q86XE5 327 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 OR2AE1Q8NHA4 323 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 FBXW5Q969U6 566 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 FAHD2AQ96GK7 314 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 FAM173AQ9BQD7 235 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 TM2D1Q9BX74 207 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 KMT2EQ8IZD2 1858 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 KNTC1P50748 2209 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 FXYD6-FXYD2A0A087WZ82 144 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 RFPL4AA6NLU0 287 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 RFPL4AL1F8VTS6 287 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 LINC01387J3KSC0 135 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 MT-CO3P00414 261 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 PATE4P0C8F1 98 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 PPP3CBP16298 524 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 HLA-GP17693 338 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 CD34P28906 385 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 HLXQ14774 488 aaPredicted RBP12.23□□□□□ -0.45
LIMK1-208ENST00000538333 NHLRC3Q5JS37 347 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 TMEM164Q5U3C3 297 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 LPCAT3Q6P1A2 487 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 TMUB2Q71RG4 321 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 SEMA6DQ8NFY4 1073 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 OR51T1Q8NGJ9 327 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 AKR7LQ8NHP1 331 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 FGFBP3Q8TAT2 258 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 PIGTQ969N2 578 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 TMEM45BQ96B21 275 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 FXYD6Q9H0Q3 95 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 GPR35Q9HC97 309 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 KCNN3Q9UGI6 736 aa12.23□□□□□ -0.45
LIMK1-208ENST00000538333 MED13Q9UHV7 2174 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 C9orf170A2RU37 121 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 CEACAM18A8MTB9 384 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 EFSO43281 561 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 IFNA6P05013 189 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 LHX2P50458 406 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 SORDQ00796 357 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 PSG4Q00888 419 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 RIPPLY1Q0D2K3 151 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 ACTBL2Q562R1 376 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 DCAF10Q5QP82 559 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 ABHD17BQ5VST6 288 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 C3P1Q6ZMU1 363 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 SULF2Q8IWU5 870 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 ADAD2Q8NCV1 583 aaKnown RBP12.22□□□□□ -0.45
LIMK1-208ENST00000538333 OR10K1Q8NGX5 313 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 MITD1Q8WV92 249 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 ST8SIA4Q92187 359 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 REEP6Q96HR9 211 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 HES7Q9BYE0 225 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 GSX2Q9BZM3 304 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 WNT5BQ9H1J7 359 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 ZNF230Q9UIE0 474 aaPredicted RBP12.22□□□□□ -0.45
LIMK1-208ENST00000538333 NOP16Q9Y3C1 178 aaKnown RBP12.22□□□□□ -0.45
LIMK1-208ENST00000538333 CUL9Q8IWT3 2517 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 IGKV3D-15A0A087WSY6 115 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 HPNP05981 417 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 RPA2P15927 270 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 SERPINA2P20848 420 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 GMFBP60983 142 aa12.22□□□□□ -0.45
LIMK1-208ENST00000538333 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms