RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 OR1M1Q8NGA1 313 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 OR56B2PQ8NGI1 322 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 OR5R1Q8NH85 324 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 OR2AE1Q8NHA4 323 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 PPP1R35Q8TAP8 253 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 WIPF2Q8TF74 440 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-204ENST00000537068 SPTSSAQ969W0 71 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 SGK3Q96BR1 496 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 CCL13Q99616 98 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 NMNAT2Q9BZQ4 307 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 SEMA6AQ9H2E6 1030 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 CCDC134Q9H6E4 229 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 OPA3Q9H6K4 179 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 GORASP2Q9H8Y8 452 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 EFCAB1Q9HAE3 211 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 KRCC1Q9NPI7 259 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-204ENST00000537068 FGFR1OP2Q9NVK5 253 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 C1orf123Q9NWV4 160 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 ADA2Q9NZK5 511 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 DUX4Q9UBX2 424 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 SAMD4AQ9UPU9 718 aaKnown RBP4.28□□□□□ -1.72
SNHG1-204ENST00000537068 POLR1DQ9Y2S0 133 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 FAM32AQ9Y421 112 aaKnown RBP4.28□□□□□ -1.72
SNHG1-204ENST00000537068 CAPN7Q9Y6W3 813 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 IGHV3OR15-7A0A075B7D8 119 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 hCG_38984A0A1B0GV85 526 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 GGT3PA6NGU5 568 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 M0R1W7 72 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 ACOT8O14734 319 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 NPFFO15130 113 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 NDUFB3O43676 98 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 GADD45GO95257 159 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 GRPP07492 148 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 NCK1P16333 377 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 ZNF823P16415 610 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 DCTDP32321 178 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 GRK5P34947 590 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 SAA4P35542 130 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 RPS27P42677 84 aaKnown RBP4.27□□□□□ -1.73
SNHG1-204ENST00000537068 CAV3P56539 151 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 SCAND1P57086 179 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 SMIM11AP58511 58 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 MXRA7P84157 204 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNHG1-204ENST00000537068 FGD3Q5JSP0 725 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 WDR38Q5JTN6 314 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 STUMQ69YW2 141 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 DHRS7BQ6IAN0 325 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-204ENST00000537068 SLC16A9Q7RTY1 509 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 DCXRQ7Z4W1 244 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-204ENST00000537068 PDZD9Q8IXQ8 264 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 CMTM4Q8IZR5 234 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 Q8N2B8 174 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 LNX2Q8N448 690 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 BOLLQ8N9W6 283 aaKnown RBP4.27□□□□□ -1.73
SNHG1-204ENST00000537068 SDR9C7Q8NEX9 313 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 OR10Z1Q8NGY1 313 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 OR52J3Q8NH60 311 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 ANGPTL6Q8NI99 470 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 FAM110DQ8TAY7 271 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-204ENST00000537068 FANK1Q8TC84 345 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 PIFOQ8TCI5 191 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 LRRC29Q8WV35 223 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 ST8SIA4Q92187 359 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 SLAMF6Q96DU3 332 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 SEH1LQ96EE3 360 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 PYURFQ96I23 114 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 RAB3IPQ96QF0 476 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-204ENST00000537068 KCTD14Q9BQ13 255 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-204ENST00000537068 IFT27Q9BW83 186 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 FN3KQ9H479 309 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 RANBP3Q9H6Z4 567 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-204ENST00000537068 PPP1R3EQ9H7J1 279 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 SIRT7Q9NRC8 400 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 MBNL3Q9NUK0 354 aaKnown RBP4.27□□□□□ -1.73
SNHG1-204ENST00000537068 HAO2Q9NYQ3 351 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 ZNF319Q9P2F9 582 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 FAM96BQ9Y3D0 163 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 MAB21L2Q9Y586 359 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 COMMD3-BMI1R4GMX3 469 aa4.27□□□□□ -1.73
SNHG1-204ENST00000537068 BTBD17A6NE02 478 aa4.26□□□□□ -1.73
SNHG1-204ENST00000537068 TVP23AA6NH52 213 aa4.26□□□□□ -1.73
SNHG1-204ENST00000537068 ANKRD30BLA7E2S9 258 aa4.26□□□□□ -1.73
SNHG1-204ENST00000537068 ZNF878C9JN71 531 aa4.26□□□□□ -1.73
SNHG1-204ENST00000537068 ZNF593O00488 134 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-204ENST00000537068 CDIPTO14735 213 aa4.26□□□□□ -1.73
SNHG1-204ENST00000537068 SIGLEC5O15389 551 aa4.26□□□□□ -1.73
SNHG1-204ENST00000537068 HLA-DQA2P01906 255 aa4.26□□□□□ -1.73
SNHG1-204ENST00000537068 ACAA1P09110 424 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-204ENST00000537068 HSD17B1P14061 328 aa4.26□□□□□ -1.73
SNHG1-204ENST00000537068 H2AFXP16104 143 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-204ENST00000537068 EEF1B2P24534 225 aaKnown RBP4.26□□□□□ -1.73
SNHG1-204ENST00000537068 FMO3P31513 532 aa4.26□□□□□ -1.73
SNHG1-204ENST00000537068 PYCR1P32322 319 aa4.26□□□□□ -1.73
SNHG1-204ENST00000537068 NAA10P41227 235 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-204ENST00000537068 ENTPD1P49961 510 aa4.26□□□□□ -1.73
SNHG1-204ENST00000537068 PRKXP51817 358 aa4.26□□□□□ -1.73
SNHG1-204ENST00000537068 SLC25A1P53007 311 aa4.26□□□□□ -1.73
SNHG1-204ENST00000537068 DLX1P56177 255 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms