RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 FLYWCH2Q96CP2 140 aaKnown RBP2.4□□□□□ -2.03
PRKDC-205ENST00000535375 C19orf60Q96EN9 201 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 KCNS1Q96KK3 526 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 ZNF488Q96MN9 340 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 TMEM243Q9BU79 118 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 MAP1LC3CQ9BXW4 147 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 LZTFL1Q9NQ48 299 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 FBXO8Q9NRD0 319 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 IFNKQ9P0W0 207 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 SIGLEC9Q9Y336 463 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 AHDC1Q5TGY3 1603 aaPredicted RBP2.39□□□□□ -2.03
PRKDC-205ENST00000535375 A0A0A6YYD5 115 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 NDUFS8O00217 210 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 TRAPPC6AO75865 159 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 ZNF806P0C7X5 589 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 LOXP28300 417 aaPredicted RBP2.39□□□□□ -2.03
PRKDC-205ENST00000535375 NUP62P37198 522 aaPredicted RBP2.39□□□□□ -2.03
PRKDC-205ENST00000535375 ATP5J2P56134 94 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 TAS2R46P59540 309 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 PAFAH1B2P68402 229 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 ZNF616Q08AN1 781 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 SIGLEC14Q08ET2 396 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 PNOCQ13519 176 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 RBMY1FQ15415 496 aaKnown RBP2.39□□□□□ -2.03
PRKDC-205ENST00000535375 MPV17L2Q567V2 206 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 RNASE13Q5GAN3 156 aaKnown RBP2.39□□□□□ -2.03
PRKDC-205ENST00000535375 STEAP4Q687X5 459 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 APOBEC3HQ6NTF7 200 aaKnown RBP2.39□□□□□ -2.03
PRKDC-205ENST00000535375 CD300LGQ6UXG3 332 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 CIRBP-AS1Q8TBR5 109 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 TMEM234Q8WY98 164 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 C18orf15Q96N68 181 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 GGTLC1Q9BX51 225 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 FGF23Q9GZV9 251 aaPredicted RBP2.39□□□□□ -2.03
PRKDC-205ENST00000535375 WFDC1Q9HC57 220 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 FBXO6Q9NRD1 293 aaPredicted RBP2.39□□□□□ -2.03
PRKDC-205ENST00000535375 C8orf17Q9NRJ1 99 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 ENOPH1Q9UHY7 261 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 KLF12Q9Y4X4 402 aa2.39□□□□□ -2.03
PRKDC-205ENST00000535375 AQRO60306 1485 aaKnown RBP eCLIP2.39□□□□□ -2.03
PRKDC-205ENST00000535375 DFFAO00273 331 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 POLR1CO15160 346 aaPredicted RBP2.38□□□□□ -2.03
PRKDC-205ENST00000535375 GCGP01275 180 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 TRBV12-3P01733 135 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 CXCR1P25024 350 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 GNRHRP30968 328 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 GGT2P36268 569 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 HCCSP53701 268 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 SLC35B1P78383 322 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 PPIDQ08752 370 aaKnown RBP2.38□□□□□ -2.03
PRKDC-205ENST00000535375 VAMP3Q15836 100 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 IGFBP7Q16270 282 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 ATP6V1FQ16864 119 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 LIN9Q5TKA1 542 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 KDM4DQ6B0I6 523 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 UNQ9165/PRO28630Q6UXU0 137 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 TMPRSS11AQ6ZMR5 421 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 SNX20Q7Z614 316 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 MIR7-3HGQ8N6C7 128 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 UBAC2Q8NBM4 344 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 OR6K6Q8NGW6 343 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 OR10Z1Q8NGY1 313 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 OR13G1Q8NGZ3 307 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 LRRC39Q96DD0 335 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 RDH12Q96NR8 316 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 RBBP8Q99708 897 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 HAUS4Q9H6D7 363 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 PLEKHF2Q9H8W4 249 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 SLC38A10Q9HBR0 1119 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 RBFOX1Q9NWB1 397 aaKnown RBP2.38□□□□□ -2.03
PRKDC-205ENST00000535375 ADA2Q9NZK5 511 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 VAX2Q9UIW0 290 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 FLVCR2Q9UPI3 526 aa2.38□□□□□ -2.03
PRKDC-205ENST00000535375 JCADQ9P266 1359 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 TRAV19A0A0A6YYK7 116 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 IGHV2OR16-5A0A0B4J2B6 119 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 IGHV7-4-1A0A0J9YVY3 117 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 RFXANKO14593 260 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 TTC4O95801 387 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 IGHV3-11P01762 117 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 CD74P04233 296 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 IL1RNP18510 177 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 TALDO1P37837 337 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 FBXO48Q5FWF7 155 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 CPTPQ5TA50 214 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 TMEM236Q5W0B7 351 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 PID1Q7Z2X4 250 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 SLC30A8Q8IWU4 369 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 SYS1Q8N2H4 156 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 OR4M1Q8NGD0 313 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 RXFP4Q8TDU9 374 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 CENPNQ96H22 339 aaPredicted RBP2.37□□□□□ -2.03
PRKDC-205ENST00000535375 GABRG3Q99928 467 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 SIKE1Q9BRV8 207 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 EMC6Q9BV81 110 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 ARV1Q9H2C2 271 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 STMN3Q9NZ72 180 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 SIGLEC7Q9Y286 467 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 HES2Q9Y543 173 aa2.37□□□□□ -2.03
PRKDC-205ENST00000535375 IGKV2-24A0A0C4DH68 120 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms