RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ADAM8P78325 824 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 MPPED2Q15777 294 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 MEP1BQ16820 701 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 TUSC1Q2TAM9 212 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 ACSM3Q53FZ2 586 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 HIST2H3PS2Q5TEC6 136 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 ZNF626Q68DY1 528 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 KLHL24Q6TFL4 600 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 HIST2H3AQ71DI3 136 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 BHLHA15Q7RTS1 189 aaPredicted RBP10.72□□□□□ -0.69
SCARB1-204ENST00000535005 CDC20BQ86Y33 519 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 LINC00518Q8N0U6 118 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 SYS1Q8N2H4 156 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 STPG2Q8N412 459 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 ZNF454Q8N9F8 522 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 STEAP2Q8NFT2 490 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 OR2T27Q8NH04 317 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 CA5BP1Q8WTZ4 195 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 KCNJ16Q9NPI9 418 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 PIPOXQ9P0Z9 390 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 ATPIF1Q9UII2 106 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 LHFPL6Q9Y693 200 aa10.72□□□□□ -0.69
SCARB1-204ENST00000535005 ARPC4-TTLL3A0A0A6YYG9 625 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 WIPF3A6NGB9 483 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 OGG1O15527 345 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 ZG16O60844 167 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 HPXP02790 462 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 UCHL1P09936 223 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 OR10A3P58181 314 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 PCBD1P61457 104 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 B2MP61769 119 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 ACTA2P62736 377 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 ACTG2P63267 376 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 FAM27E3Q08E93 113 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 GK2Q14410 553 aaPredicted RBP10.71□□□□□ -0.69
SCARB1-204ENST00000535005 DPY19L4Q7Z388 723 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 PDZD9Q8IXQ8 264 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 CLRN3Q8NCR9 226 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 OR6N2Q8NGY6 317 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 OTOSQ8NHW6 89 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 RNASE6Q93091 150 aaKnown RBP10.71□□□□□ -0.69
SCARB1-204ENST00000535005 ORAI1Q96D31 301 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 FBXO17Q96EF6 278 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 PGLYRP3Q96LB9 341 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 SLC25A32Q9H2D1 315 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 HRASLSQ9HDD0 168 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 OBP2BQ9NPH6 170 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 SLC17A5Q9NRA2 495 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 TMEM14AQ9Y6G1 99 aa10.71□□□□□ -0.69
SCARB1-204ENST00000535005 A0A096LPE4 126 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 A0A1W2PPZ6 126 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 OR5H1A6NKK0 313 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 ZNF879B4DU55 563 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 C16orf97H3BN30 126 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 GPRIN2O60269 458 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 RAD51DO75771 328 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 CLDN14O95500 239 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 ALDOBP05062 364 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 MRPL3P09001 348 aaKnown RBP10.7□□□□□ -0.7
SCARB1-204ENST00000535005 MMP7P09237 267 aaPredicted RBP10.7□□□□□ -0.7
SCARB1-204ENST00000535005 SPARCP09486 303 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 ATF1P18846 271 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 CXCL2P19875 107 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 ALOX5APP20292 161 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 NAA10P41227 235 aaPredicted RBP10.7□□□□□ -0.7
SCARB1-204ENST00000535005 GMFBP60983 142 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 SEC61A1P61619 476 aaKnown RBP10.7□□□□□ -0.7
SCARB1-204ENST00000535005 HLXQ14774 488 aaPredicted RBP10.7□□□□□ -0.7
SCARB1-204ENST00000535005 CDSNQ15517 529 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 HIKESHIQ53FT3 197 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 SHEQ5VZ18 495 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 SLC18B1Q6NT16 456 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 SLC16A14Q7RTX9 510 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 SLC35F2Q8IXU6 374 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 WDR31Q8NA23 367 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 RAB40AQ8WXH6 277 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 FBXW5Q969U6 566 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 LRRC46Q96FV0 321 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 KCNK7Q9Y2U2 307 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 DOPEY1Q5JWR5 2465 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 UBE2QL1A1L167 161 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 FAM90A27PA6NNH2 459 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 PLA2G2AP14555 144 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 FAUP35544 74 aaKnown RBP10.7□□□□□ -0.7
SCARB1-204ENST00000535005 PSMA6P60900 246 aaKnown RBP10.7□□□□□ -0.7
SCARB1-204ENST00000535005 SCRN3Q0VDG4 424 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 TSC22D1Q15714 1073 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 TIMM23BQ5SRD1 257 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 OTPQ5XKR4 325 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 CFAP77Q6ZQR2 320 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 RHOUQ7L0Q8 258 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 SSX8Q7RTT4 187 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.7□□□□□ -0.7
SCARB1-204ENST00000535005 LRRC18Q8N456 261 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 GJC3Q8NFK1 279 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 OR10H4Q8NGA5 316 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 OR2AJ1Q8NGZ0 328 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 FGFBP3Q8TAT2 258 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 ST7LQ8TDW4 575 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 NANOS1Q8WY41 292 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms