RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, human

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BEST1-208	ENST00000534553	HIST1H1D	P16402	221 aa	Known RBP	11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	ACKR3	P25106	362 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	MPZ	P25189	248 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	MTCP1	P56278	107 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	CBX3	Q13185	183 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	KCNJ8	Q15842	424 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	TMEM255A	Q5JRV8	349 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	FAM214B	Q7L5A3	538 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	SNIP1	Q8TAD8	396 aa	Known RBP	11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	WNT2B	Q93097	391 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	MRPS24	Q96EL2	167 aa	Known RBP	11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	PRRT1	Q99946	306 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	GAL3ST1	Q99999	423 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	GINS4	Q9BRT9	223 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	ALX4	Q9H161	411 aa	Predicted RBP	11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	SLC2A8	Q9NY64	477 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	NKIRAS2	Q9NYR9	191 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553	PLEKHA6	Q9Y2H5	1048 aa		11.64	□□□□□ -0.55
BEST1-208	ENST00000534553		A0A096LPE4	126 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553		A0A1W2PPZ6	126 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	SERPINE3	A8MV23	424 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	DISC1	C4P0D8	188 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	ARPC1B	O15143	372 aa	Known RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	HLA-H	P01893	362 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	ANXA3	P12429	323 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	APLNR	P35414	380 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	ATP1B3	P54709	279 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	GNG2	P59768	71 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	MRPS15	P82914	257 aa	Known RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	ZNF92	Q03936	586 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	SLC22A6	Q4U2R8	563 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	ACTBL2	Q562R1	376 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	RPUSD3	Q6P087	351 aa	Known RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	TRAPPC6B	Q86SZ2	158 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	FJX1	Q86VR8	437 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	CSNK2A3	Q8NEV1	391 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	PIGT	Q969N2	578 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	DACT3	Q96B18	629 aa	Predicted RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	ZNF486	Q96H40	463 aa	Predicted RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	SELENOI	Q9C0D9	397 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	METTL9	Q9H1A3	318 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	OR10A4	Q9H209	315 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	TP63	Q9H3D4	680 aa	Predicted RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	IFT46	Q9NQC8	304 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	B3GNT2	Q9NY97	397 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	ING4	Q9UNL4	249 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	CNOT1	A5YKK6	2376 aa	Known RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	MUC6	Q6W4X9	2439 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	C5orf49	A4QMS7	147 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	KLK10	O43240	276 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	EFS	O43281	561 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	SSNA1	O43805	119 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	CREBL2	O60519	120 aa	Predicted RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	IL18BP	O95998	194 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	EDN3	P14138	238 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	MGMT	P16455	207 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	ZP1	P60852	638 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	GUSBP1	Q15486	140 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	RNASE10	Q5GAN6	216 aa	Known RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	C9orf135	Q5VTT2	229 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	PLXDC2	Q6UX71	529 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553		Q6ZS92	163 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	TMEM104	Q8NE00	496 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	PXT1	Q8NFP0	134 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	OR51T1	Q8NGJ9	327 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	OR5L1	Q8NGL2	311 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	CCDC107	Q8WV48	283 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	BCL2L2	Q92843	193 aa	Predicted RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	BOD1	Q96IK1	185 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	POM121L2	Q96KW2	1035 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	FYTTD1	Q96QD9	318 aa	Known RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	REPIN1	Q9BWE0	567 aa	Known RBP	11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	C12orf49	Q9H741	205 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	GPR173	Q9NS66	373 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	IL36G	Q9NZH8	169 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	PRSS50	Q9UI38	385 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	KLK13	Q9UKR3	277 aa		11.63	□□□□□ -0.55
BEST1-208	ENST00000534553	LOC100509620	A0A075B734	347 aa		11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	UBE2QL1	A1L167	161 aa		11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	CSTB	P04080	98 aa	Known RBP	11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	SULT1A3	P0DMM9	295 aa		11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	SULT1A4	P0DMN0	295 aa		11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	MRPL49	Q13405	166 aa	Known RBP	11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	FAAP20	Q6NZ36	180 aa		11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	CRIP3	Q6Q6R5	217 aa		11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	TFAP2E	Q6VUC0	442 aa		11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	ASCL4	Q6XD76	172 aa		11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	OR51S1	Q8NGJ8	323 aa		11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	OR6K3	Q8NGY3	331 aa		11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	TRIB1	Q96RU8	372 aa		11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	ZMAT3	Q9HA38	289 aa	Known RBP	11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	ANAPC10	Q9UM13	185 aa		11.62	□□□□□ -0.55
BEST1-208	ENST00000534553	ZNF407	Q9C0G0	2248 aa		11.61	□□□□□ -0.55
BEST1-208	ENST00000534553	MEIS3P1	A6NDR6	274 aa		11.61	□□□□□ -0.55
BEST1-208	ENST00000534553		A8MV72	311 aa	Predicted RBP	11.61	□□□□□ -0.55
BEST1-208	ENST00000534553	MFNG	O00587	321 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms